Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0830 ATGTACGTTCGTTGTTGGCCTTCAACGTCCCTCCCTGTGACTCTACCCTTCGCTTTACCAGATATGTCGGCCAACGATCCCGGTTTTATACTCTTCGGCCAGAAGATGTCTTCTTCCTCCGCCTCTTCTCAGATTCCGGCCAACTCTCCTCCCGAGCATGATTGGGGTAGCTCAAAGAAATCAGAAGTGGGAATGCCTGCTACTGAAAACTCAGAACGACAAAATGAGCATCAGAAGAATAATGAGGCAACGAAGATAAGCAGCAGCACAGAAGAATTTAAACTGATGAAGAAACCAGACAAGATTCAGCAGTGTCCAAGATGCAACAGCATGGACACAAAGTTCTGTTACTTCAATAACTACAACGTGAATCAACCTCGTCATTTCTGCAAGAGCTGCCACAGATATTGGACTGCTGGCGGAGCAATGAGAAATGTCCCGGTTGGCGCCGGAAGACGAAGGAACAGGCAACTATCCTCACCATACCATCGTCACACCTCAGTATCCTCTGAAGGCATTCCAGTTCCAACCCCAAACACAGACTCATCTTCTCATCAACATTTCTCAACTCTTGAATCAACCCCATCAGCTTTCAAGTCATCACCAGCTGATAATACCAGTACATTGTTGAGATTTGGTCCAGACACCCCTGCTTCTGAATCTTCTGTGATCAGTTCTGGTGGTGGTAGGGGGAATGAAGTATCAGAACTTGCAATGCAATGGCATAGAGGTGTGTCCAATCTGATGAACACATCAAATGGTGTGAGATGTTATCCTGCTGCTCCATGGGTGTTTCCAGCTCAGTGGTATGCTGAGAATAAGATTGGCACACCAAACATTCCTGTACAATTTGTGGCTGCTCCATGTTGGAGTGATGGAAATGTTGTTTCAATTGGCCCTAATGGTCGCCTCTCCTCCTCATCCTCTGCTAGTAATGGCCCAACCCTTGGAAAACACTGA 960 0.4667 MYVRCWPSTSLPVTLPFALPDMSANDPGFILFGQKMSSSSASSQIPANSPPEHDWGSSKKSEVGMPATENSERQNEHQKNNEATKISSSTEEFKLMKKPDKIQQCPRCNSMDTKFCYFNNYNVNQPRHFCKSCHRYWTAGGAMRNVPVGAGRRRNRQLSSPYHRHTSVSSEGIPVPTPNTDSSSHQHFSTLESTPSAFKSSPADNTSTLLRFGPDTPASESSVISSGGGRGNEVSELAMQWHRGVSNLMNTSNGVRCYPAAPWVFPAQWYAENKIGTPNIPVQFVAAPCWSDGNVVSIGPNGRLSSSSSASNGPTLGKH 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0830 319 MobiDBLite consensus disorder prediction 161 207 - -
Mibi02g0830 319 MobiDBLite consensus disorder prediction 40 98 - -
Mibi02g0830 319 PANTHER CYCLIC DOF FACTOR 2 24 319 IPR045174 GO:0003700|GO:0006355
Mibi02g0830 319 ProSitePatterns Zinc finger Dof-type signature. 105 141 IPR003851 GO:0003677|GO:0006355
Mibi02g0830 319 Pfam Dof domain, zinc finger 100 157 IPR003851 GO:0003677|GO:0006355
Mibi02g0830 319 MobiDBLite consensus disorder prediction 157 207 - -
Mibi02g0830 319 ProSiteProfiles Zinc finger Dof-type profile. 103 157 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0830 Mibi-ChrMibi02 8070055 8071817 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0830 79 319 C2C2-Dof Transcription Factor Family AT5G39660 41.045 8.18e-40 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mibi02g0830 zf-Dof 2.9e-31 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g0830 02 8070055 8071817 Mibi02g0830 02 8070055 8071817 ECH