Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1718 ATGGCCCTTCCTCGGTTCTTACTGTTACTCGCAATCGCCGCCGCCGCCGTATCATGGTCGTCTCTGGTGGAGGCTCAGCTAGAAGCGAAGTTCAAATGCAACTCCGAAGGCAAAACATGCCGTTCCCTGGTAGATTATTTATCCCCAAACGAAACCACCCTAGGCCACATCCAAAAGCTCTTCAAAATAAAGCACTTTTTAGACATTGTTGGCGTTAATTCCCTCCCTTCCACAACACGATCCAACTTCCCCGTCAAAAATGGCACCATTATCAAAATCCCATTTCCCTGTAAGTGCTCCAACGGCACTGGTTTATCCAACAACACTCCTCTGTATACAATCCAGAAAGGCGACACGCTTTACCACATAGCTGTGGAGATTTTCTCGGGCTTGGTTACTTTCCCACAACTTCAAGCCCTTAACAATATATCTGACCCTTTAACGATTCAGCCTGGTCAGAAGGTGTGGGTCCCTCTACCTTGTAGCTGCGACCAGGTCGACGGCGCCGATGTTGTCCATTATGGTCACCGTGTGGCTGTCGGAAGCACGTTTGAGATTATTGCTCAGCAATATGGTACCACACAGGATACTCTTCTTGCCCTCAACAATATTTCTGATCCTAAGTCTCTTCAAGCTGGTCAAACCATCGATGTTCCCCTCAAAGCTTGTTCCTCATCCGCGTTGAGAAATGACTCCCTGGACTATCCTCTGCTGGTTGCAAATGGTACCAACACCTACACTGCCAATGGTTGTGTTAAGTGCAGCTGTGACTTCTCCGCCAATAACGCCACATTGCAATGCCAACCATCACAAGTTACACCATATAGATGGCATACATGCCCATCCATGCTATGTGGAAATTCAACCATTGGCAGCATCACTTCTACAGCTTCCTGCTCTCGGACCATTTGTTCTTACATTGGTTATAACAACAACAACCAAACTATTAATACTGCTCTTGTCGACGAGTCCACTTGTCCTGCACCAACAGGATCAGGATCAGGAGCATCCAGGATCGGCTTGCAAGGCTGGGGTTGGAATCATCTTTTGATGGCCATTCACTCAGTCATCTTTTGTGTCTATCTCTTGTAG 1092 0.4734 MALPRFLLLLAIAAAAVSWSSLVEAQLEAKFKCNSEGKTCRSLVDYLSPNETTLGHIQKLFKIKHFLDIVGVNSLPSTTRSNFPVKNGTIIKIPFPCKCSNGTGLSNNTPLYTIQKGDTLYHIAVEIFSGLVTFPQLQALNNISDPLTIQPGQKVWVPLPCSCDQVDGADVVHYGHRVAVGSTFEIIAQQYGTTQDTLLALNNISDPKSLQAGQTIDVPLKACSSSALRNDSLDYPLLVANGTNTYTANGCVKCSCDFSANNATLQCQPSQVTPYRWHTCPSMLCGNSTIGSITSTASCSRTICSYIGYNNNNQTINTALVDESTCPAPTGSGSGASRIGLQGWGWNHLLMAIHSVIFCVYLL 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1718 363 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 7 329 - -
Mibi01g1718 363 CDD LysM 112 157 IPR018392 -
Mibi01g1718 363 Pfam LysM domain 112 158 IPR018392 -
Mibi01g1718 363 Pfam LysM domain 176 219 IPR018392 -
Mibi01g1718 363 Gene3D LysM domain 107 164 IPR036779 -
Mibi01g1718 363 ProSiteProfiles LysM domain profile. 174 218 IPR018392 -
Mibi01g1718 363 SMART LysM_2 175 219 IPR018392 -
Mibi01g1718 363 SMART LysM_2 111 158 IPR018392 -
Mibi01g1718 363 ProSiteProfiles LysM domain profile. 110 157 IPR018392 -
Mibi01g1718 363 SUPERFAMILY LysM domain 175 219 IPR036779 -
Mibi01g1718 363 SUPERFAMILY LysM domain 111 159 IPR036779 -
Mibi01g1718 363 CDD LysM 176 218 IPR018392 -
Mibi01g1718 363 Gene3D LysM domain 165 230 IPR036779 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1718 16 339 LysM Receptor-like Protein (LYPs) Gene Family AT2G17120 45.092 3.69e-84 258