Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1373 ATGTCAACAGTGAGAGATCCTGCTATAAAGCTATTTGGTAGAGATATTCCTGTTGAATCAACTCACATCACCGACTCGCCTCAAATTATGAGCAGGCATGATAAATCAACTGTTGAAGGAAATGTTCCTTTCAGAGCTGGTAAGCAGCATAATCCTATTGAAGAAGCAGACGGACACAGTTATGGAAGTCCTACTTTTGAAGTGGAGGCTAAAGTAGTTCACAGAACTAAGGACTGCAAGGCTGGTAGTAGAGATATGGATCATCAAGAAAAAGCTTTCAAGAAACCAGATAAGGTGCTGCCTTGTCCCCGCTGCAACAGCTTGGAGACGAAGTTTTGCTATTTCAATAATTACAATGTTAATCAACCTAGGCATTTCTGCAAAAATTGCCAAAGATATTGGACAGCTGGGGGGATAATTAGGAATGTTCCTGTGGGGGCTGGAAAGCGCAAAAATAAACATTCGTCATTACCTGTTAGCTCAGATATAGCATCTGGTTCCCACTTGGACTCCAACTCCTTACCCATAGATTCAACACCTAGTGGAGGAATGGGGAATAGCTCCGGAATTGGGGAGGAAGTTCCTCTTTGTGAATCATTGGAAACTGTGTTAAATCTAAAAGGCCAGAAAAAAACTGAAGTTGACTCCTCAATTGATGATGATAGTGAGGAGCCTTCCAGAGATTTTGCATCCAGGGAAAAGGAATGCTCAGTAAATGAAATTGAGCTGATAGGTTTGCAACAACACTTGAATGGTTTTAATCCTCTACATCCACTTCATTATTATCCTGTACCTCCCTGGGCTTATCAATGGAGCCCATGTTGGAATTCGATGGTATTTAGACCCAGTCCTGCTTACACGGGCTCTGCAACCATGATGGCAGTCCCAGGTTTCACTGCACCAACAATAGAATTACCAGCAGTACCTTTTTATGCAAGTCCTCTTCCAAGCTGGACTGGGCAGAAGGAAGAGTTTCCATTTACTGGGTCTACAATAAGTGGGATCCCATCACCTTCCTCTTCCACTAACAGCAGTGTTTGTTCTGGGAATAAGTCTCCAACTTTGGGAAAACATTCCAGAGATGCAAGTACTCAAGCAGGTGATGCAATGAGACAGAATCTTTGGGTACCCAAGACTCTGAGAATTAATGATCCCGAAGAAGCTGCAAGGAGTTCTATATGGTCTGCTTTTGGTGCAAAGATTGAACAGAATAAACCAATTATCAAAGGCAGCGTTTTTAAATCTTTTGAACCTAAGTCGGAAGGTGCAAGCTCTCATACTTCAAATACCGATCAAATTCTGAATGCAAACCCTGCTGCTTTTTCTCGCTCAGAATCATTTCAGGAAAGAATCTGA 1356 0.4226 MSTVRDPAIKLFGRDIPVESTHITDSPQIMSRHDKSTVEGNVPFRAGKQHNPIEEADGHSYGSPTFEVEAKVVHRTKDCKAGSRDMDHQEKAFKKPDKVLPCPRCNSLETKFCYFNNYNVNQPRHFCKNCQRYWTAGGIIRNVPVGAGKRKNKHSSLPVSSDIASGSHLDSNSLPIDSTPSGGMGNSSGIGEEVPLCESLETVLNLKGQKKTEVDSSIDDDSEEPSRDFASREKECSVNEIELIGLQQHLNGFNPLHPLHYYPVPPWAYQWSPCWNSMVFRPSPAYTGSATMMAVPGFTAPTIELPAVPFYASPLPSWTGQKEEFPFTGSTISGIPSPSSSTNSSVCSGNKSPTLGKHSRDASTQAGDAMRQNLWVPKTLRINDPEEAARSSIWSAFGAKIEQNKPIIKGSVFKSFEPKSEGASSHTSNTDQILNANPAAFSRSESFQERI 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1373 451 MobiDBLite consensus disorder prediction 417 451 - -
Mibi01g1373 451 MobiDBLite consensus disorder prediction 418 444 - -
Mibi01g1373 451 MobiDBLite consensus disorder prediction 146 190 - -
Mibi01g1373 451 PANTHER CYCLIC DOF FACTOR 2 4 450 IPR045174 GO:0003700|GO:0006355
Mibi01g1373 451 MobiDBLite consensus disorder prediction 212 232 - -
Mibi01g1373 451 MobiDBLite consensus disorder prediction 329 370 - -
Mibi01g1373 451 ProSiteProfiles Zinc finger Dof-type profile. 100 154 IPR003851 GO:0003677|GO:0006355
Mibi01g1373 451 ProSitePatterns Zinc finger Dof-type signature. 102 138 IPR003851 GO:0003677|GO:0006355
Mibi01g1373 451 MobiDBLite consensus disorder prediction 157 186 - -
Mibi01g1373 451 MobiDBLite consensus disorder prediction 208 232 - -
Mibi01g1373 451 Pfam Dof domain, zinc finger 97 154 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1373 Mibi-ChrMibi01 18099274 18101702 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1373 4 449 C2C2-Dof Transcription Factor Family AT5G39660 32.877 3.05e-64 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mibi01g1373 zf-Dof 1e-31 No_clan