Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g02102 ATGGCTACTCAAGAGGTTAATAAGCCTCTTTCACTTCCTCCATACCCTGAGATGATTATGAAGGCACTGGAAGCACTGAATGAACCAAATGGTTCAAACAAATCATCAATTTCTAACTACATAGAATCAATCTATGGAGAATTACCAGAAGGCCATTCAATTGTTCTTGCAAATCACCTTAACCAGATGAAGGAAAATGGTGACCTTGTTTTTGCAAAGAACAACTACATGAAGCCTGATCCAAATGCACCACCAAAGAGAGGACGTGGAAGACCACCAAAGCCAAAGGATCCATTGGCTCCACCACCAGCTGCTGTTCTGTCCCCACCAAGGCCAAGAGGTCGTCCCCCTAAGGACCCTAATGCACCTCCCAAGACCCCTAAGGCTGCTTCAAGTGGAAGAGGAAGGGGTAGGCCAAAGAAAGTTCAAAGGACTGAGAATGTTTCAAATCCAAGTGGTGGAGATGGTGCTATTGCTGCTGCTGCTGCTGCTGAGGTTGATGATGATGATGCTGCTCCAAGTGTTGCTGCTGTTGCTGTTCCAACTACTAGTGGAAGGGGAAGGGGTAGGCCTCCTAAGGTTAAGCCTCAGATGACTGAAGTCAGTGTTGAATCATAG 618 0.4644 MATQEVNKPLSLPPYPEMIMKALEALNEPNGSNKSSISNYIESIYGELPEGHSIVLANHLNQMKENGDLVFAKNNYMKPDPNAPPKRGRGRPPKPKDPLAPPPAAVLSPPRPRGRPPKDPNAPPKTPKAASSGRGRGRPKKVQRTENVSNPSGGDGAIAAAAAAEVDDDDAAPSVAAVAVPTTSGRGRGRPPKVKPQMTEVSVES 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g02102 205 MobiDBLite consensus disorder prediction 73 205 - -
Mepo7g02102 205 FunFam HMG-Y-related protein A 7 89 - -
Mepo7g02102 205 Pfam linker histone H1 and H5 family 13 73 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mepo7g02102 205 SUPERFAMILY "Winged helix" DNA-binding domain 8 87 IPR036390 -
Mepo7g02102 205 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 11 80 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mepo7g02102 205 SMART AT_hook_2 185 197 IPR017956 GO:0003677
Mepo7g02102 205 SMART AT_hook_2 133 145 IPR017956 GO:0003677
Mepo7g02102 205 SMART AT_hook_2 110 122 IPR017956 GO:0003677
Mepo7g02102 205 SMART AT_hook_2 86 98 IPR017956 GO:0003677
Mepo7g02102 205 MobiDBLite consensus disorder prediction 95 124 - -
Mepo7g02102 205 PRINTS AT-hook-like domain signature 131 141 IPR017956 GO:0003677
Mepo7g02102 205 PRINTS AT-hook-like domain signature 86 96 IPR017956 GO:0003677
Mepo7g02102 205 PRINTS AT-hook-like domain signature 108 119 IPR017956 GO:0003677
Mepo7g02102 205 PRINTS High mobility group protein (HMGY) signature 112 123 IPR000116 GO:0000785|GO:0003677|GO:0005634|GO:0006355
Mepo7g02102 205 PRINTS High mobility group protein (HMGY) signature 84 96 IPR000116 GO:0000785|GO:0003677|GO:0005634|GO:0006355
Mepo7g02102 205 PRINTS High mobility group protein (HMGY) signature 101 112 IPR000116 GO:0000785|GO:0003677|GO:0005634|GO:0006355
Mepo7g02102 205 SMART h15plus2 9 75 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mepo7g02102 205 Gene3D - 8 89 IPR036388 -
Mepo7g02102 205 PANTHER HISTONE H1 8 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g02102 Mepo-Chr7 31415110 31416594 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo7g02102 7 31415110 31416594 Mepo3g05384 3 67321191 67323703 PCT