Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mepo7g00923 | ATGGATGAATCACCATCAGCACCAAAATCTCTGATGGAGAATCTATTAGGCCTTCTGAGGATTCGTGTGAAGCGTGGTGTTAACCTTGCTGTTCGTGATGTTCGTAGCAGTGATCCTTATGTTGTTATCAAGATGTATAATCAGAAACTTAAGACTCATGTGATAAAAAAGAATGTTAATCCTGAGTGGAATGAAGACCTTACTCTGTCTGTTATAGATCCAAATCACCCAGTTACATTGACTGTGTATGATCATGACACTTTTAGCAAAGATGACAAAATGGGAGATGCAGTATTTGACTCCTTGACCTACATAGAAGCCCTGAGGACGAATGTAACCGGCCTTGCAAATGGCACCGTAATCAAGCGGATACAACCAAGCAAGCACAACTGCCTTGCCGAGGAGAGCTGTATCTATTATAACAATGGCAAAATTATCCAAGATATGATCCTTAGATTGCAAAATGTGGAATGTGGTGAAGTGGAAATCAGTTTGCACTGGATTGATCTTCCTGGTTCTAAAGGTTTATAA | 531 | 0.4011 | MDESPSAPKSLMENLLGLLRIRVKRGVNLAVRDVRSSDPYVVIKMYNQKLKTHVIKKNVNPEWNEDLTLSVIDPNHPVTLTVYDHDTFSKDDKMGDAVFDSLTYIEALRTNVTGLANGTVIKRIQPSKHNCLAEESCIYYNNGKIIQDMILRLQNVECGEVEISLHWIDLPGSKGL | 176 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mepo7g00923 | 176 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 14 | 174 | IPR044562 | - | |
| Mepo7g00923 | 176 | ProSiteProfiles | C2 domain profile. | 1 | 114 | IPR000008 | - | |
| Mepo7g00923 | 176 | SMART | C2_3c | 18 | 113 | IPR000008 | - | |
| Mepo7g00923 | 176 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 13 | 102 | IPR035892 | - | |
| Mepo7g00923 | 176 | CDD | C2_ArfGAP | 16 | 159 | - | - | |
| Mepo7g00923 | 176 | Gene3D | C2 domain | 13 | 174 | IPR035892 | - | |
| Mepo7g00923 | 176 | Pfam | C2 domain | 17 | 100 | IPR000008 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mepo7g00923 | Mepo-Chr7 | 14423070 | 14425816 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mepo7g00923 | 49 | 176 | C2H2 Transcription Factor Family | AT1G70790 | 60.000 | 4.12e-51 | 159 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Mepo3g05403 | 3 | 67597880 | 67600022 | Mepo7g00923 | 7 | 14423070 | 14425816 | ECH | |
| Mepo2g03035 | 2 | 39988473 | 39989807 | Mepo7g00923 | 7 | 14423070 | 14425816 | ECH | |
| Mepo7g00923 | 7 | 14423070 | 14425816 | Mepo7g00923 | 7 | 14423070 | 14425816 | ECH | |
| Mepo2g05112 | 2 | 58962191 | 58963416 | Mepo7g00923 | 7 | 14423070 | 14425816 | PCT |