Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g00160 ATGAATGGTGAAGGTGACATGTTTGTTAAAGATTCTAGTTTCATGCTCTTTGGTAAGAAGATTCCAGTGATGAGTTCTTCTCAGATTCAGGCCAATTCTACAACCATGATTTCTTGCAGTAACTCAAAGCATAAAGGAAATGATGTGCCTCATACTCAAAACATTGAGAAATCAAAGAATTCTTCTAATGAAGAAAATGAATCAAAAGTTAACAAAAGCATTGTGGAAGATGATATGGAGACAAGCAGCACAGATCAAGACAAAGTCCTAAAGAAACCAGACAAGATTGTTCAATGTCCAAGATGCAAAAGTTTCGACACAAAATTTTGTTATTTCAATAACTACAATGTCAATCAACCTCGACATTTCTGTCGGAGTTGTCACAGATATTGGACCAACGGTGGAACAATGAGAAACGTTGCTGTCGGAGCAGGGAGACGGAAGAACAAACACATAGCTTCTCAATATCGCCACATGATTGTAGCGTCTGATGGAATTCCGACCGCCAGTTTAGATTCCAATGACTCTTCTAAGTACCAACAGGTCTCAAATCTTGAATCTGGTGCGGTTTTTAGGTGTTCAAATGATAACGGTATTGTCCTTAAATTTGGTCGGGAAAATGCCTCTCTCGATGAATCCAAAGGTTCAATGCTTAATCTTATGAACAATAGGAGAAATGTTGATGCAAGTGGTAACAATTGTAGAGAAAATGGAGAGGAAGAATCATCGTTATGTGTATCTTCTGTGACAAACGGTCATACTCGAGGAAACGAGTTATTCGAATCCGAACAGAATAGGCCAAAACCTATGCAGAGCTACCCTGCATCTTCATGGATAATTCCACTGAATCAAAGATGGAACAATGTTACTTCTATGGTTCAATCATCAATGCAGATGTGTAACCCTTATGGCATTGATCCTACTGCAATGCAGTGGTGTCACGCGCCGATGGTTGCGGTTACAAACATTTTCACACCAAACATTGGCTTGCAATTTGTTCCTGGATCAAACAGGAATGGAACACCTTTGTGTGGTGGTGGAAATGGAAATGTGTCCATAGGTTCAAATGGTTGCATTTCACCTTCTTCATCTACTACTAGTAATAGTTGTATCTCAGGTAATGGCACACCAATCCTTGGCAAACACACATGA 1152 0.395 MNGEGDMFVKDSSFMLFGKKIPVMSSSQIQANSTTMISCSNSKHKGNDVPHTQNIEKSKNSSNEENESKVNKSIVEDDMETSSTDQDKVLKKPDKIVQCPRCKSFDTKFCYFNNYNVNQPRHFCRSCHRYWTNGGTMRNVAVGAGRRKNKHIASQYRHMIVASDGIPTASLDSNDSSKYQQVSNLESGAVFRCSNDNGIVLKFGRENASLDESKGSMLNLMNNRRNVDASGNNCRENGEEESSLCVSSVTNGHTRGNELFESEQNRPKPMQSYPASSWIIPLNQRWNNVTSMVQSSMQMCNPYGIDPTAMQWCHAPMVAVTNIFTPNIGLQFVPGSNRNGTPLCGGGNGNVSIGSNGCISPSSSTTSNSCISGNGTPILGKHT 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g00160 383 MobiDBLite consensus disorder prediction 38 88 - -
Mepo7g00160 383 ProSitePatterns Zinc finger Dof-type signature. 99 135 IPR003851 GO:0003677|GO:0006355
Mepo7g00160 383 Pfam Dof domain, zinc finger 94 151 IPR003851 GO:0003677|GO:0006355
Mepo7g00160 383 ProSiteProfiles Zinc finger Dof-type profile. 97 151 IPR003851 GO:0003677|GO:0006355
Mepo7g00160 383 MobiDBLite consensus disorder prediction 38 57 - -
Mepo7g00160 383 MobiDBLite consensus disorder prediction 58 88 - -
Mepo7g00160 383 PANTHER CYCLIC DOF FACTOR 2 10 382 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g00160 Mepo-Chr7 3820062 3822330 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g00160 7 172 C2C2-Dof Transcription Factor Family AT3G47500 43.169 1.87e-39 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mepo7g00160 zf-Dof 1.8e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g00160 - - mtr:25495812 669.848