Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03977 ATGGCAGAGAAAGAGAGTTTGTTTTCTATAGGTGATTGGATGAGAATACCAATTTGCACTTTCTTCAAGGATGCTAGACTAGTGTTTAAATTAGACAATCTTGGTCGCGAAATATTGTCAATTGCACTGCCGGCTGCAATGGCTTTGACAGCTGATCCTATAGCATCACTGGTCGATACGGCCTTCATTGGCCAAATAGGTCCAGTGGAGCTTGCTGCAGTAGGAGTTTCCATAGCTCTATTCAATCAAGCATCAAGGATCTTTATATTCCCACTAGTCAGTGTCACAACTTCTTTTGTGGCTGAGGAAGATGCCCTAAGCGAAGCAAGCTCACAGGTAGAGGAGAATGGATGCTTGGAAGCTGTGACACCTCCGGATGCTGAAACCAAAGAGTTCTTACCGCAGAAAAATTCGGTTGTTGAAAGCTTTAATGTAGTTAAGGATGATCAACATAAGAGAAGGAAAATTCCTTCAGCTTCGTCGGCGTTATATTTTGGAGGTATCCTTGGCCTCGTCCAGGCAACATTACTTATTTCTGCAGCAAAACCTTTATTGAACTTCATGGGAGTGACTTCTGATTCTCCTATGCTACATCCTGCACAGCAGTACTTGAAATTGAGATCTCTTGGTGCTCCTGCGGTTCTTCTTTCATTAGCGATGCAGGGAGTTTTTCGAGGATTTAAAGACACTAAAACTCCTTTATATGCCACTGTGGCAGGAGATTTGACGAACATAGCACTAGATCCGCTGTTCATTTTTGTGTTCCGTATGGGTGTCAACGGTGCAGCCATTGCACATGTTATATCTCAGTATCTACTTTCAGCTATACTCCTGTGGAGTTTGAACAAACAAGTTGATCTTATACCTCCAAGCATCAAACATATGCAATTCGACCGATTTGCCAAAAATGGTTTTCTATTATTCATGAGAGTCATTGCGGTAACATTCTGTGTGACACTGGCTGCATCATTAGCTGCACACCACGGATCAACATCCATGGCTGCATTTCAAGTCTGTCTGCAGGTTTGGTTGGCAGTGTCTCTTCTTGCTGATGGTCTGGCTGTTGCCGGGCAGGCGATTCTTGCAGGTGCATTTGCTAACAAGGACTATGAAAAGGCCTCAACAACTGCTACTCGAGTATTGCAGATGGGCGTGGTTCTTGGATTGGCACTTGCATTCATTCTTGGAACAGGATTGCACTTTGGAGCTAAACTATTTACAAAAGATGTCGATGTCCTCCACCTCATTAGAGTTGGGGTCCCGTTTGTAGCACTCACTCAACCCCTGAACTGTTTGGCCTTTGTATTTGATGGTGTCAACTTTGGGGCATCTGATTTTGCATATTCAGCCTTCTCCATGGTTATAGTGGCAATTATTAGCATAATTTGTCTACTTATTTTGTCATCTGCTGGTGGATTCATTGGAATTTGGGTTGCACTGACAATCTATATGAGTTTAAGAGCCTTTGCTGGCTTCTTGAGGATTGGAACTGGATCAGGACCATGGGAATTCCTAAGGAGCTAA 1524 0.4337 MAEKESLFSIGDWMRIPICTFFKDARLVFKLDNLGREILSIALPAAMALTADPIASLVDTAFIGQIGPVELAAVGVSIALFNQASRIFIFPLVSVTTSFVAEEDALSEASSQVEENGCLEAVTPPDAETKEFLPQKNSVVESFNVVKDDQHKRRKIPSASSALYFGGILGLVQATLLISAAKPLLNFMGVTSDSPMLHPAQQYLKLRSLGAPAVLLSLAMQGVFRGFKDTKTPLYATVAGDLTNIALDPLFIFVFRMGVNGAAIAHVISQYLLSAILLWSLNKQVDLIPPSIKHMQFDRFAKNGFLLFMRVIAVTFCVTLAASLAAHHGSTSMAAFQVCLQVWLAVSLLADGLAVAGQAILAGAFANKDYEKASTTATRVLQMGVVLGLALAFILGTGLHFGAKLFTKDVDVLHLIRVGVPFVALTQPLNCLAFVFDGVNFGASDFAYSAFSMVIVAIISIICLLILSSAGGFIGIWVALTIYMSLRAFAGFLRIGTGSGPWEFLRS 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03977 507 NCBIfam MATE family efflux transporter 44 477 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mepo6g03977 507 Pfam MatE 309 462 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mepo6g03977 507 Pfam MatE 159 250 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mepo6g03977 507 CDD MATE_DinF_like 34 497 IPR044644 -
Mepo6g03977 507 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 13 507 IPR044644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03977 Mepo-Chr6 52024604 52029038 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03977 6 52024604 52029038 Mepo1g03539 1 40990378 40997117 ECH
Mepo6g03977 6 52024604 52029038 Mepo6g03977 6 52024604 52029038 ECH