Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03775 ATGGATCCTTCTTGTGGACAACCTCAGCAAATGTCAAGCCAGTCATCAATGGAAAACATGTTAGGTTGCTCAAAAGAAGAGCAAGAAAGAAAACCAAAACCTCAACCAGAACAAGCTTTGAACTGTCCAAGATGCAACTCAACCAATACCAAATTCTGTTACTACAACAACTATAGTCTTACTCAGCCAAGATATTTCTGCAAATCTTGCAGAAGGTATTGGACCAAAGGAGGAACCCTAAGGAATGTTCCTGTTGGTGGTGGATGCAGAAAAAACAAAAGATCATCACCATCATCATCATCTTCAAAGAGGGTTCAAGATCAAACATTCACACCAAATCTCAACCCGTTTAATAACCTCCCTCATTCAACTTATGATCATAATTCCAATGATTTTGCATTAGCATTAGCTAGGCTTCAAAAGCAATCATGTGGACAAATGGGTTATGATGATCATGATGTTTCAAATCTAGGGAATTCAGGCATGAACAACCATTCAGCTATAAACCATGGATTTATGGATGCAATTAGAAGTGGGTTATTTCTTGGAAATGGATTACATTATAATAATAATGTTCAGAATATGTATGGTGTGTATGGAAATGGGGACAATGGTGAAGTAAATAGTGGTAACAATGCAAATAACAATGCTTGTGGGGTTAGTGAAGAGATGATGTTTCCCTATGATCAAGAAATGAACAATGTGAAGCAAGAAATGTGCAGTGGAAGGGAACAAATTAGTGAAAGTAAAGTTTTTGGTGGTTTTCCATGGCAGCTGAATGGAGGATCAAACATCGGTGAAGTTGAATCGGCAAGACCAAGTTGGAATAATGGTTTCACATCTCCTTGGCAAGGGCTTCTCCATAGTCCCCTAATGTAG 879 0.3834 MDPSCGQPQQMSSQSSMENMLGCSKEEQERKPKPQPEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSPSSSSSKRVQDQTFTPNLNPFNNLPHSTYDHNSNDFALALARLQKQSCGQMGYDDHDVSNLGNSGMNNHSAINHGFMDAIRSGLFLGNGLHYNNNVQNMYGVYGNGDNGEVNSGNNANNNACGVSEEMMFPYDQEMNNVKQEMCSGREQISESKVFGGFPWQLNGGSNIGEVESARPSWNNGFTSPWQGLLHSPLM 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03775 292 Pfam Dof domain, zinc finger 38 94 IPR003851 GO:0003677|GO:0006355
Mepo6g03775 292 MobiDBLite consensus disorder prediction 1 22 - -
Mepo6g03775 292 ProSitePatterns Zinc finger Dof-type signature. 42 78 IPR003851 GO:0003677|GO:0006355
Mepo6g03775 292 ProSiteProfiles Zinc finger Dof-type profile. 40 94 IPR003851 GO:0003677|GO:0006355
Mepo6g03775 292 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 17 201 IPR045174 GO:0003700|GO:0006355
Mepo6g03775 292 MobiDBLite consensus disorder prediction 84 122 - -
Mepo6g03775 292 MobiDBLite consensus disorder prediction 1 41 - -
Mepo6g03775 292 MobiDBLite consensus disorder prediction 92 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03775 Mepo-Chr6 49927575 49929818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03775 38 292 C2C2-Dof Transcription Factor Family AT2G28510 43.590 1.39e-46 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mepo6g03775 zf-Dof 2.8e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03775 - - gmx:778106 355.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03775 6 49927575 49929818 Mepo6g03775 6 49927575 49929818 ECH
Mepo6g03775 6 49927575 49929818 Mepo2g01934 2 28281121 28283101 PCT