LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo6g02571	ATGGCAGCAATGAAGTTTGGTGGCAGCATGAGGAACGCACTCCGATCATCAAAGGCGCTTCTTCTCTACCGCTCTTCTCATCTTCTCTCTGCCAATTTTCTCATGCAAATTCCTCTCACTCGCAAGATGAGCACCGATGCACATAGTATTGCCTCCCAGCTTAACACTTCTGGGCTGTTGAGAACTCAAGGCCTCATTGGAGGGAAATGGAGGGATGCTTATGATGGAAAAACCATAAAGGTTTATAATCCAGCAACTGGTGAATCTATAGCAGATGTAGCATGCATGGGTGGAAGGGAAACAAATGATGCAATTTCCTCTGCTTTTGATGCATATAAATCATGGAGCAAAACCACTGCTTCTGAACGGAGTAAACTTTTGAGGAAATGGTATGATTTGCTAATGGCACACAAAGAAGAGTTAGCACAACTTATAACTTTGGAGCAAGGAAAGCCTCTTAAAGAGTCTCTGGGTGAGATAAGTTATGGTGCTGCCTTTATTGAGTTTGCATCAGAGGAAGCAAAACGTATATATGGGGATATAATTCCTGCACCTCTATCTGATCGGAGGTTATTTGTTTTAAAGCAGCCTGTAGGGGTTGTAGGTGCAATTACACCTTGGAACTTTCCCCTTGCTATGATTACCCGAAAGGTTGGCCCAGCCCTTGCATGTGGATGTACAGTGGTCATAAAGCCCTCTGAACTTACGCCTCTGACTGCTTTAGCTGCAGCAGAACTCTCTATTCAAGCTGGAATACCTGAGGGTGTTGTGAATGTGGTTATGGGAAATGCTCCTGATATTGGAGACGCTTTAATCGCAAGTCCACAGGTAAGGAAGATTACATTCACTGGCTCAACGGCTGTTGGAAAGAAATTGATGGCAGGTTCTGCTGAGACGGTTAAAAAAGTATCTCTGGAACTTGGTGGCAACGCTCCATGCATAGTTTTTGATGATGCTGACCTGGATGTTGCAGTGAAAGGAACACTTGCAGCAAAGTTCCGGAATAGCGGACAGACATGTGTTTGTGCAAATAGAATTCTTGTGCAAGAAGGTATATATGACAAATTTGCCAATGCATTGCTCAATGCTGTTCAGAGTATGAAAGTTGGAGATGGTTTTAGTGAAGGTGTAGCTCAGGGCCCTCTGATCAATGAAGCTGCTGTAAAAAAGGTGGAGTCCTTGATTCATGATGCTACATCAAAGGGGGCAAAAGTTATTCTTGGGGGTAAAAGACATAGCCTTGGATCAACTTTTTATGAACCAACAGTCATCACTGATGTTGACAATGAGATGGATATATCAAGACAGGAAGCATTTGGACCTGTCGCACCCCTTTTGAGATTCAAAACTGAAGAGGATGCTATCAGAATTGCTAATGACACTAATGCAGGCTTGGGTTCATACGTATTTACAAACAGTATTCCACGATCATGGCGTGTGGCTGAGGCTCTTGAATATGGACTTGTGGGTGTTAATGAAGGAGTAATTTCAACCGAGGTGGCTCCATTTGGTGGAGTTAAACAGTCTGGCCTCGGAAGAGAAGGTTCCAAATATGGGATGGATGAATATTTAGAGATCAAGTATGTTTGTATGGGAAACATGAACAAAGATTGA	1614	0.4318	MAAMKFGGSMRNALRSSKALLLYRSSHLLSANFLMQIPLTRKMSTDAHSIASQLNTSGLLRTQGLIGGKWRDAYDGKTIKVYNPATGESIADVACMGGRETNDAISSAFDAYKSWSKTTASERSKLLRKWYDLLMAHKEELAQLITLEQGKPLKESLGEISYGAAFIEFASEEAKRIYGDIIPAPLSDRRLFVLKQPVGVVGAITPWNFPLAMITRKVGPALACGCTVVIKPSELTPLTALAAAELSIQAGIPEGVVNVVMGNAPDIGDALIASPQVRKITFTGSTAVGKKLMAGSAETVKKVSLELGGNAPCIVFDDADLDVAVKGTLAAKFRNSGQTCVCANRILVQEGIYDKFANALLNAVQSMKVGDGFSEGVAQGPLINEAAVKKVESLIHDATSKGAKVILGGKRHSLGSTFYEPTVITDVDNEMDISRQEAFGPVAPLLRFKTEEDAIRIANDTNAGLGSYVFTNSIPRSWRVAEALEYGLVGVNEGVISTEVAPFGGVKQSGLGREGSKYGMDEYLEIKYVCMGNMNKD	537

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo6g02571	537	FunFam	Succinate-semialdehyde dehydrogenase I	76	321	-	-
	Mepo6g02571	537	FunFam	Aldehyde dehydrogenase, putative	501	527	-	-
	Mepo6g02571	537	CDD	ALDH_F5_SSADH_GabD	81	531	-	-
	Mepo6g02571	537	PANTHER	SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL	56	534	-	-
	Mepo6g02571	537	ProSitePatterns	Aldehyde dehydrogenases glutamic acid active site.	305	312	IPR029510	GO:0016491
	Mepo6g02571	537	FunFam	Succinate-semialdehyde dehydrogenase I	309	498	-	-
	Mepo6g02571	537	ProSitePatterns	Aldehyde dehydrogenases cysteine active site.	333	344	IPR016160	GO:0016491
	Mepo6g02571	537	SUPERFAMILY	ALDH-like	57	535	IPR016161	GO:0016491
	Mepo6g02571	537	Pfam	Aldehyde dehydrogenase family	70	529	IPR015590	GO:0016491
	Mepo6g02571	537	NCBIfam	succinate-semialdehyde dehydrogenase	81	527	IPR010102	GO:0009013\|GO:0009450
	Mepo6g02571	537	Gene3D	Aldehyde Dehydrogenase; Chain A, domain 2	309	498	IPR016163	GO:0016620
	Mepo6g02571	537	Gene3D	Aldehyde Dehydrogenase; Chain A, domain 1	76	523	IPR016162	GO:0016491

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo6g02571	Mepo-Chr6	35368331	35379298	Dispersed/Transposed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mepo6g02571	6	35368331	35379298	Mepo6g02571	6	35368331	35379298	ECH