Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02567 ATGGAAAGAATGTTCCCTCCAAAGAAGCCTTCAACTATGAATTCACATGATAGACCCATGTGTGTTCAAGGTGACTCAGGTCTTGTTCTTACAACTGACCCAAAACCTCGTCTTCGATGGACTGTTGAACTCCATGAACGTTTTGTTGATGCTGTTACTCAGCTTGGAGGACCTGATAAGGCCACTCCTAAAACTATCATGAGGGTTATGGGTGTGAAGGGTCTTACTCTTTACCATCTCAAGAGCCATCTTCAGAAATTTAGGCTTGGAAAGCAACCCCACAAGGAATTCAATGATCACTCAATTAAGGATGGTATGAGAGCTTCAGCTTTAGAACTGCAACGGAATACTGCTTCCTCTTCTGCTATGATTGGCCGAAACATGAATGAGATGCAAATTGAGGTGCAGAGAAGACTACATGAGCAGCTTGAGGTACAAAAACACCTTCAACTAAGAATTGAAGCTCAAGGGAAATACATGCAAAGTATATTGGAGAAAGCTTATCAAACACTTGCAGGTGAAAACATGGCATCTCCTACAACTAATAACTTAAAGGGTGTTGTTATTGGACCTCATGGAATGGCTGAAATGGGACTATTGAAAGAATTTGGTTCACCTCTTAGTTTTTCATCTTTTCAAGATCTTGATCTTTTCGGAGGGGGTGGTGGTGGTGGTGATCAACTCGACCTTCAACAAAACATGGACAAGCAAACCCTAGAACATCATGGATTTATGCAAATCAATGAGAATCTATGTCTTGGCAAAAAAAGGCCTAACCCTAACACTAACCCTTATAGTGGAAATGGAAAAAACCCATTAATGTGGAGTGATGATTTAAGGCTTCAAGATTTAGGGACAGCTTCATCATGCTTAGATGATCCTTTCAAAGGTGATCAAATTCAAATTGCACCACCATCATTGGATAGAGGAAGTGATATTGAAACTATAGATATTTATGATACAAAGCCTTTACTTCAAGGGGAAATTTTATGTGAAAAGAAATTTGATGCATCAATGAATAAACTTGAAAGACCCTCACCAAGAAGAGGGCCATCTCTTCATGCTGAAAGAATGAGTCCTATGATTAGTACTGGTACTATGGCACAAGGTAGAGGCTCACCATTTGGATGA 1131 0.3988 MERMFPPKKPSTMNSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDGMRASALELQRNTASSSAMIGRNMNEMQIEVQRRLHEQLEVQKHLQLRIEAQGKYMQSILEKAYQTLAGENMASPTTNNLKGVVIGPHGMAEMGLLKEFGSPLSFSSFQDLDLFGGGGGGGDQLDLQQNMDKQTLEHHGFMQINENLCLGKKRPNPNTNPYSGNGKNPLMWSDDLRLQDLGTASSCLDDPFKGDQIQIAPPSLDRGSDIETIDIYDTKPLLQGEILCEKKFDASMNKLERPSPRRGPSLHAERMSPMISTGTMAQGRGSPFG 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02567 376 Pfam Myb-like DNA-binding domain 38 86 IPR001005 -
Mepo6g02567 376 MobiDBLite consensus disorder prediction 1 20 - -
Mepo6g02567 376 Pfam MYB-CC type transfactor, LHEQLE motif 131 170 IPR025756 -
Mepo6g02567 376 NCBIfam myb-like DNA-binding domain, SHAQKYF class 35 90 IPR006447 GO:0003677
Mepo6g02567 376 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 92 IPR017930 -
Mepo6g02567 376 MobiDBLite consensus disorder prediction 340 376 - -
Mepo6g02567 376 FunFam Myb family transcription factor 34 92 - -
Mepo6g02567 376 SUPERFAMILY Homeodomain-like 34 90 IPR009057 -
Mepo6g02567 376 Gene3D - 34 92 - -
Mepo6g02567 376 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 12 188 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02567 Mepo-Chr6 35288820 35291373 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mepo6g02567 Myb_DNA-binding 2.1e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g02567 6 35288820 35291373 Mepo6g02567 6 35288820 35291373 ECH
Mepo6g02567 6 35288820 35291373 Mepo1g03182 1 36491685 36494315 PCT