Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01559 ATGACAAGAAAATGTTTTGTTTGTTTCATGCTTCTTGAAGTTGTTTGTTTCATTGTAATTGGTGTTTATGGTGACAAGAATGTTCCTACTAGGAAAATTTCTGATGGAAATCATCATGTAACAATGAGAAGATTGCAATCATTTAAAGCCTCTTTAACAAGACATGATTCCATTGCTTCAACACCATCATCTTCTTTTGCACCTTCTCCTTCTTCTCAGCCAGCTGAGGGTATGCACAATCCAAGAGTATACCATGTGACATCATATGGTGCAGACCCAACAGGCAATTCAGATAGCACTGAAGCATTACTTGCAGCCATAGCAGATGCAGCCAACGGTCCAAGCAAAGGATATTTGATGGAAGGCATCAGTAACCTTGGAGGTGCACAGATTAATCTTGAAGGTGGAAATTACATGATCAGAAAGTCACTCAAGTTACCGGTAGCCAGCGTTGGGAACATCATGATACATGGAGGAACCATAAAAGCCTCAGATGATTTTCCTAATGATGGCTACATTATTGATTTATCAACCTCTTCAAATGAAAATGATGAAAAAAATTCACCTTCATCATCCTACAATTTTGAGTACATAACTCTCAAGGACCTCTTATTGGATTCAAACTTTAGAGGAGGAGGCATTTCAGTCATAAACTCCCTCAGAACAAACATAGACAACTGTTACATTACACATTTCACAACCAATGGAATTTTAGTCCAAAGTGGCCATGAAACATACATAAGAAACTCTTTCCTTGGCCAACACATAACCGCCGGAGGCGATAAAAACGAAAGGAATTTCTCAGGCACAGGAATAAACATCCAAGGTAACGATAACGCTGTCACCGATGTTGTAATTTTCTCTGCTGCTATTGGAATCATGGTAACTGGTCAAGCAAACACATTTTCTGGTGTACATTGTTACAATAAGGCCACTGGATTCGGTGGTACCGGAATTTATCTGAAACTACCTGGTTTAACACAAACAAGGATTGTAAATTCTTACATGGATTACACTAGTATTGTTGCTGAAGATCCTGTTCAACTTCATATTTCTAGTAGTTTCTTCCTTGGTGATGCCAATATTGTGTTGAAATCTATGAAAGGTGTTTTAAATGGTGTTACTATTGTAGATAACATGTTCTCTGGATCAAATCAAGGTGTTGAAATTGTTCATTTGGATAAATCAAATAGTCCTTTTCATCAAGTTGATCAAGTTATTGTTGATAGGAACGTTGCGACGGGGATGAATTTAAAGGCTACTGTTGCGAAAAGGTCGTTGCAAGGGAATGGAACTTCATGGAATGTTGATTTTAACAACATTCTTCTTTTTCCTGACCATATCAAAAATGTTCAGTACTCATTAAGTTCAACAGGTAGCAGTTTTCCAAATCATGCTATCAGAAATGTGTCGGACAATCGCGTTGTGATTGAAACGAATGAAGCAGTTGCTGCGAATGTTTTTGTCGCGGTGGATCAAAGCTTGTCAAGTTGA 1494 0.3802 MTRKCFVCFMLLEVVCFIVIGVYGDKNVPTRKISDGNHHVTMRRLQSFKASLTRHDSIASTPSSSFAPSPSSQPAEGMHNPRVYHVTSYGADPTGNSDSTEALLAAIADAANGPSKGYLMEGISNLGGAQINLEGGNYMIRKSLKLPVASVGNIMIHGGTIKASDDFPNDGYIIDLSTSSNENDEKNSPSSSYNFEYITLKDLLLDSNFRGGGISVINSLRTNIDNCYITHFTTNGILVQSGHETYIRNSFLGQHITAGGDKNERNFSGTGINIQGNDNAVTDVVIFSAAIGIMVTGQANTFSGVHCYNKATGFGGTGIYLKLPGLTQTRIVNSYMDYTSIVAEDPVQLHISSSFFLGDANIVLKSMKGVLNGVTIVDNMFSGSNQGVEIVHLDKSNSPFHQVDQVIVDRNVATGMNLKATVAKRSLQGNGTSWNVDFNNILLFPDHIKNVQYSLSSTGSSFPNHAIRNVSDNRVVIETNEAVAANVFVAVDQSLSS 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01559 497 Gene3D - 83 495 IPR012334 -
Mepo6g01559 497 MobiDBLite consensus disorder prediction 59 79 - -
Mepo6g01559 497 FunFam Polygalacturonase QRT3 86 488 - -
Mepo6g01559 497 Pfam Pectate lyase superfamily protein 86 313 IPR024535 -
Mepo6g01559 497 SUPERFAMILY Pectin lyase-like 82 470 IPR011050 -
Mepo6g01559 497 PANTHER POLYGALACTURONASE QRT3 14 495 IPR039279 GO:0004650
Mepo6g01559 497 SMART pbh1 151 176 IPR006626 -
Mepo6g01559 497 SMART pbh1 276 297 IPR006626 -
Mepo6g01559 497 SMART pbh1 371 392 IPR006626 -
Mepo6g01559 497 SMART pbh1 219 241 IPR006626 -
Mepo6g01559 497 MobiDBLite consensus disorder prediction 59 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01559 Mepo-Chr6 17144935 17147318 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g01559 6 17144935 17147318 Mepo6g01559 6 17144935 17147318 ECH