Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01545 ATGGCTTCTTCTTCTTTTCCACTTTATCAAACAAGCTTCTTCTCAAAAACCCAGTTCAAAGGTTTGCGCCATGGCTATTTGTGGCGACCCACTTACTCGTTTGGTTTTTGTGCTGAAAACAAAGTACAACCTGTTAAAGCTTCTGTTGAAACTGCCCCATTTCCTTTGCTTCAGCCTCTTAAAGATGAAGAAACAGCATCTGAGTTGGAGCCTGTAGATCCTGATTTCTACAAGATAGGATTCGTCCGAAGTATGCGAGCTTATGGAGTTGATTTTAAGGAAGGGCCAAATGGTTTTGGTGTGTATGCTTCTAAAGATGTCGAACCTCTTCGCCGACCAAGGGTTATAATGGAAATTCCTCTTGAATTGATGCTAACCATAAGCAAGAAACTACCATGGATGTTTTTCCCTGATATAATTCCCCTTGGTCATCCAATATTTGATATTATCAACTCAACAAATCCAGAGACAGATTGGGATTTACGATTAGCATGCCTTCTCTTGTTTTCATTTGACTGCAAAGACAACTTTTGGCAGTATTACGGTGATTTCTTACCCAGTGCAGATGAAAGTACTAGCTTACTTCTAGCTACAGAGGAGGAACTTTTGGAGCTGCAGGATCCCGATCTTGCTTCTACAATGAGAGTTCAGCAACAACGAGCTTTAGAATTCTGGGAGAAGAACTGGCATAGTGGTGCGCCGCTCAAAGTAAAACGTCTTGCTCGTGATCCTCAAAGGTTCATGTGGGCAGTAGGAATTGCACAGTCACGATGTATCAACATGCAAATGAGAATGTGTGCGCTAACTCAAGATGCAAATATGCTGATTCCTTATGCCGATATGCTGAACCATTCTTTTGAGCCAAATTGTTTTTTCCATTGGCGTTTTAAGGACAGGATGCTTGAGGTTCTTATAAATGCTGGACAGCGGATAAGAAAGGGAGATGAGATGACAGTTGATTACATGAGCGCACAGAAGAACGACATGTTAATGCAAAGATACGGATTTTCATCGCCAGTGAATCCTTGGGATGTGGTCAAATTCTCAGGCAATGCACGAATTCATTTGGATTCCTTTTTGTCAGTCTTCAACATATCTGGCCTTCCTGAAGAGTATTATCGTAACGAAGTTCTATCGAGCACTGGAGATACTTTTGTTGATGGAGCGGTCATAGCTGCAGCACGAACATTGCCAACATGGTCAGATGGAGATGTGCCTCCAATCCCAAGTGAAGAAAGGAAGGCTGCGAAGGCATTACAACAAGAGTGCAAACAAATGCTTGCAGAATTTCCTACCACCTCTAAGCAAGACCAGAAATTGTTAGATTCATCACCAGAAGCTACGAGAATGCTTGAAACTGCAATAAAGTATAGATTGCACCGAAAATTGTTAATGGAAAAAGTTATCCTAGCATTGGAGATCTATCAAGAGCAAATACTATTCTGA 1446 0.4149 MASSSFPLYQTSFFSKTQFKGLRHGYLWRPTYSFGFCAENKVQPVKASVETAPFPLLQPLKDEETASELEPVDPDFYKIGFVRSMRAYGVDFKEGPNGFGVYASKDVEPLRRPRVIMEIPLELMLTISKKLPWMFFPDIIPLGHPIFDIINSTNPETDWDLRLACLLLFSFDCKDNFWQYYGDFLPSADESTSLLLATEEELLELQDPDLASTMRVQQQRALEFWEKNWHSGAPLKVKRLARDPQRFMWAVGIAQSRCINMQMRMCALTQDANMLIPYADMLNHSFEPNCFFHWRFKDRMLEVLINAGQRIRKGDEMTVDYMSAQKNDMLMQRYGFSSPVNPWDVVKFSGNARIHLDSFLSVFNISGLPEEYYRNEVLSSTGDTFVDGAVIAAARTLPTWSDGDVPPIPSEERKAAKALQQECKQMLAEFPTTSKQDQKLLDSSPEATRMLETAIKYRLHRKLLMEKVILALEIYQEQILF 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01545 481 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 66 451 - -
Mepo6g01545 481 Pfam SET domain 98 321 IPR001214 GO:0005515
Mepo6g01545 481 FunFam Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 82 336 - -
Mepo6g01545 481 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 333 473 IPR036464 -
Mepo6g01545 481 Pfam Rubisco LSMT substrate-binding 410 462 IPR015353 -
Mepo6g01545 481 CDD SET_LSMT 89 336 - -
Mepo6g01545 481 ProSiteProfiles SET domain profile. 77 322 IPR001214 GO:0005515
Mepo6g01545 481 SUPERFAMILY SET domain 97 337 IPR046341 -
Mepo6g01545 481 Gene3D set domain protein methyltransferase, domain 1 81 336 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mepo6g01545 SET 3.2e-19 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g01545 6 16978750 16984384 Mepo6g01545 6 16978750 16984384 ECH