Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00458 ATGTTATCTAACTATGAGAAAATGGTTGTTGTCATCCCTCCAACCACTAATCAATGGCCACAGAATCAAATAGATGATGTTAAGATAATGGAAAAACAAGGTCAAGAATTTCAGCAGCAGCAGCAGCAGCAACAACAACAGCAAGCTCTCAAGTGTCCACGTTGTGACTCATCAAACACAAAGTTTTGTTACTACAACAACTACAGTTTGTCACAACCAAGACATTTCTGCAAAGCTTGCAAACGTTATTGGACAAGAGGTGGTACTCTTAGGAATGTTCCTGTTGGTGGTGGCTATAGAAGAAACAACTCAAACAAACGTAGTAGCAATACTACTCTCATCAAAAGACCCTCCACCATTGATACTACTTCTCCTTCTTCAACTCCTAGTTCCACACCAAACACCACTTCTTCCAATTCAACCTTAAATCATAATATTAGTCCTATGTTTTATGGTTTATCATGTAGTAACTCTTGTGATGTGAATCTACCATTCTCAAGGTTCAATATCTCTAGACTCTCAACAAGTTCAGGTTATGATTTTCAGCCTCAGATGAATACCATTGGATTAGGTTTTTCATCCGGGTTTACGTCCAGTGAAGCCAATGATCATAATGGTTATACAAATGGATTTACTTCAAGATATGATTCAATCTTTAGCTCTTCTTCTGCACCAAGTAATGCATCAGTTATGCCTTCTCTCTTGAGTTCTGCTCTGCTGCAACATAAATTCATCAATGATGGTAGCAACAATTTTCAGGGCTTGGAATTCAACAATTTGGGGAATGGAAGTGAGAAAGGAATGAAGAAAGATGAAGGAGAGATGGAGCATGTGGGTGGTTTGTATGATCCAGCTGCTTCTTCACTTTATTGGAATACATCATCATCATCAGCTATTGGTGTTTGGAACGATCAAGCTTCTAATATTGGTTCATCAGTTACTTCTTTGATCTAG 954 0.3826 MLSNYEKMVVVIPPTTNQWPQNQIDDVKIMEKQGQEFQQQQQQQQQQQALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGYRRNNSNKRSSNTTLIKRPSTIDTTSPSSTPSSTPNTTSSNSTLNHNISPMFYGLSCSNSCDVNLPFSRFNISRLSTSSGYDFQPQMNTIGLGFSSGFTSSEANDHNGYTNGFTSRYDSIFSSSSAPSNASVMPSLLSSALLQHKFINDGSNNFQGLEFNNLGNGSEKGMKKDEGEMEHVGGLYDPAASSLYWNTSSSSAIGVWNDQASNIGSSVTSLI 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00458 317 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 34 217 IPR045174 GO:0003700|GO:0006355
Mepo6g00458 317 Pfam Dof domain, zinc finger 48 104 IPR003851 GO:0003677|GO:0006355
Mepo6g00458 317 Coils Coil 27 47 - -
Mepo6g00458 317 MobiDBLite consensus disorder prediction 98 140 - -
Mepo6g00458 317 ProSitePatterns Zinc finger Dof-type signature. 52 88 IPR003851 GO:0003677|GO:0006355
Mepo6g00458 317 ProSiteProfiles Zinc finger Dof-type profile. 50 104 IPR003851 GO:0003677|GO:0006355
Mepo6g00458 317 MobiDBLite consensus disorder prediction 91 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00458 Mepo-Chr6 4681634 4683480 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00458 6 317 C2C2-Dof Transcription Factor Family AT1G28310 38.551 6.39e-43 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mepo6g00458 zf-Dof 3.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00458 - - psat:127081971 355.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g00458 6 4681634 4683480 Mepo6g00458 6 4681634 4683480 ECH