Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g03188 ATGATTGAAACTAAGGACCCTGAAATTAAACTTTTTGGGAAGAAGATTCTTTTTCCTGGAGAAGGTGAAGGCCTTAACATTGCTGGTGAGGAAAATGTTTCGCCGCCGGCCGTGGCGATGGATGTAGAAGAAGAAAGAGATGGATATTTTAGTGAGTCTGAGAATGAAGATGAAGAAGAAGAAACCGAGGATCCTGAAGCAGATAAAGATACTGAGAAAAAGAAAGAAGCTGATTCTCCACCAGATGCTGCAGAGATCAAGAACAACAACAACAATTCAGCAGCAACATTACTGGAGGGTATTCAGAACCCAAAAACACCTTCCATAGATGAAGAAAATTCAAAATCTGAAAACGAACAAAGTGAAACAACAGCAAACAACAACAACGCTCAAGAGAAGACACTAAAGAAACCAGACAAATTACTCCCGTGTCCACGTTGCAACAGCGCGGACACAAAATTTTGTTACTATAATAATTACAACGTCAATCAGCCGCGCTATTTTTGCAAGGCGTGTCAAAGATATTGGACTGCAGGCGGAACCATGAGAAATGTTCCGGTTGGTGCAGGGAGAAGAAAAAATAAGAACAATTCTTCGTCACATTATCGCCACATCACCATCTCTGAGGCTCTTGATGCAGCAAGAATTGTTTCTCCTAATGGAACTCATCATCTTCAAAATTTGAAAAACAATGGTAGAGTTCTCAGCTTTGGATTGGATCATCCACATATCTATGATTCAATGTCAAATGATCTCAATCCTGCAGAGAAAAAGGTTCTTAATGACACTCGAAATAATGGTGATCGTTTTTCGAGTGCGTCTTCTGTTACAGTTTCAAAATCTATGGAGGAAAGTGGTAAAAACATGTCACAAGAATCATTGCCACAGCAAAATAATGGTTTCATTCCTCAAGTTCCATGTATGACTAGTGCTCCTTGGCCTTATACATGGAGTTCCGGCGCAATTCCCTCACCACAAACTTTGTGTCCTCCGGGATTTCCCATGTCATTTTACCCTGCTCCTTATTGGAATGTTCCTTGGTTTCCCGCTCATACTCCCGCGACAACACCAAGGTCTAGTCCGAAATCTCCAACGCTCGGGAAACACTCGAGGGATGATGACAACAACAACGACGAAATTGCTAAACAAGACCATTTGCAAACAGAAGAATCACCAAAACAAAGAAATGGGTGTGTTTTGGTTCCTAAAACATTGAGAATTGATGATCCAAGTGAAGCTGCAAAGAGTTCTATTTGGGAAACACTTGGAATTAAGAATGAAGGTTTGAGTAGGGGTGGTATGATTAAGGCTTTTCAATCAAAGAAAGATGGTAAAAACCATATTCAAACCTCTCCAATGTTGATGGCTAACCCTGCAGCTTTAGCTAGATCACTTAATTTCCATGAGAACTCTTGA 1416 0.4061 MIETKDPEIKLFGKKILFPGEGEGLNIAGEENVSPPAVAMDVEEERDGYFSESENEDEEEETEDPEADKDTEKKKEADSPPDAAEIKNNNNNSAATLLEGIQNPKTPSIDEENSKSENEQSETTANNNNAQEKTLKKPDKLLPCPRCNSADTKFCYYNNYNVNQPRYFCKACQRYWTAGGTMRNVPVGAGRRKNKNNSSSHYRHITISEALDAARIVSPNGTHHLQNLKNNGRVLSFGLDHPHIYDSMSNDLNPAEKKVLNDTRNNGDRFSSASSVTVSKSMEESGKNMSQESLPQQNNGFIPQVPCMTSAPWPYTWSSGAIPSPQTLCPPGFPMSFYPAPYWNVPWFPAHTPATTPRSSPKSPTLGKHSRDDDNNNDEIAKQDHLQTEESPKQRNGCVLVPKTLRIDDPSEAAKSSIWETLGIKNEGLSRGGMIKAFQSKKDGKNHIQTSPMLMANPAALARSLNFHENS 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g03188 471 MobiDBLite consensus disorder prediction 353 378 - -
Mepo5g03188 471 Coils Coil 113 133 - -
Mepo5g03188 471 ProSitePatterns Zinc finger Dof-type signature. 144 180 IPR003851 GO:0003677|GO:0006355
Mepo5g03188 471 MobiDBLite consensus disorder prediction 67 82 - -
Mepo5g03188 471 PANTHER CYCLIC DOF FACTOR 2 5 471 IPR045174 GO:0003700|GO:0006355
Mepo5g03188 471 MobiDBLite consensus disorder prediction 47 66 - -
Mepo5g03188 471 Pfam Dof domain, zinc finger 140 196 IPR003851 GO:0003677|GO:0006355
Mepo5g03188 471 MobiDBLite consensus disorder prediction 265 297 - -
Mepo5g03188 471 MobiDBLite consensus disorder prediction 84 109 - -
Mepo5g03188 471 MobiDBLite consensus disorder prediction 261 297 - -
Mepo5g03188 471 MobiDBLite consensus disorder prediction 20 141 - -
Mepo5g03188 471 ProSiteProfiles Zinc finger Dof-type profile. 142 196 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g03188 Mepo-Chr5 39023401 39026565 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g03188 1 469 C2C2-Dof Transcription Factor Family AT3G47500 46.307 9.68e-109 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mepo5g03188 zf-Dof 6.7e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g03188 - - gsj:114409713 542.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g02899 2 38774195 38777594 Mepo5g03188 5 39023401 39026565 ECH
Mepo5g03188 5 39023401 39026565 Mepo5g03188 5 39023401 39026565 ECH