Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g02944 ATGGGTGCTATGTATGAAGAGCTAAGAAGAAACCAAGAAATGGATTCTTCAAGTATTATTCATTCAAAACAACATTATCAACAACAAAATTCTGGACTACTAATGAGGTACAATTCAGCTCCAACCTCATTCCTTACAAGCCTAATCGACAACAATGTCGACAACAACGCTCAAAACTATATCAACAATGAAGAATCTTTTACAAATGAGAGTTATCTTCCATCCACAAGTTCAGAAATGGATACCATGTTATGCAAGTTGATATCAACCAACAATGGATGGAACAATTCTGAAGAAAATTTGCAAGAGTTTGATGTGAAACCTGTGAAGCAAGAAATAGGTGAATCTGTTGCACAACAGAATGGTAATTACTCTTATGGTGGATCTGAGTTGATTTACCAAGGCTTTTCAAATGGTTCTGGTAATGGTTTTTATGGATCTTTTGGTGGAGTTGACACTATGGAATCAGATGATTCCTCTCAATCTAAAATTGGTGTTAGGAATTGCTCCAATCTTATTAGGCAAAAGAGTTCACCTGCTGAGTTTTTCTCTAATGAAAATGGTCTTGCAACATTGACATTGAGAGAGGTAGAAAGCTTTAAAGCCAATGGCATCTCAAATGGTACACTTAACTTCTCATCTAGGCCATCTACTTGCTTGAAAAGGATGCCACAAATAGCTGAAAATGAAATTCAAAGCTTAGAACCAAATTGTGACCAAACTACAAATCTAGTAAATGAAAATGGTAGCTCCAAATGTCACATACCTAGCTTCACCAATGAATTTTGGGACAATTCTGCATTCAATGCACACAAAACAGAAAGTGAAGATGAAATAATGTTTTCTACTACTAATGGTTTGGAATCTCAAGAAGCAGATTTTTGCTATCAAAATCTGGGTTTGACTCATCATTTGAGTCTTCCTAGTTCTTCTACTAAGATGACATCTATGGAGAAGTTTCTTCAAGTTCAAGGTTCTGTTCCTTGTAAAATTCGAGCGAAAAGAGGGTTTGCAACTCATCCAAGAAGCATTGCAGAGAGGGTAAGAAGAACAAGAATTAGTGACAGAATCAAGAAACTGCAAGGTCTTTTCCCAAAATCAGATAAGCAAACAAGCACAGCAGATATGTTGGATTTGGCAGTTGAGTACATTAAAGACCTACAAGAACATGTACAGATGCTCACAGATTGTAAGGAAAAATGCAAATGTGCAAGTCATGAGAAGAAAAACTGTAAACCTTGTAGCTGA 1248 0.3622 MGAMYEELRRNQEMDSSSIIHSKQHYQQQNSGLLMRYNSAPTSFLTSLIDNNVDNNAQNYINNEESFTNESYLPSTSSEMDTMLCKLISTNNGWNNSEENLQEFDVKPVKQEIGESVAQQNGNYSYGGSELIYQGFSNGSGNGFYGSFGGVDTMESDDSSQSKIGVRNCSNLIRQKSSPAEFFSNENGLATLTLREVESFKANGISNGTLNFSSRPSTCLKRMPQIAENEIQSLEPNCDQTTNLVNENGSSKCHIPSFTNEFWDNSAFNAHKTESEDEIMFSTTNGLESQEADFCYQNLGLTHHLSLPSSSTKMTSMEKFLQVQGSVPCKIRAKRGFATHPRSIAERVRRTRISDRIKKLQGLFPKSDKQTSTADMLDLAVEYIKDLQEHVQMLTDCKEKCKCASHEKKNCKPCS 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g02944 415 CDD bHLH_AtbHLH_like 342 394 IPR045239 -
Mepo5g02944 415 Gene3D - 339 412 IPR036638 GO:0046983
Mepo5g02944 415 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 337 387 IPR011598 GO:0046983
Mepo5g02944 415 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 340 404 IPR036638 GO:0046983
Mepo5g02944 415 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 87 408 - -
Mepo5g02944 415 SMART finulus 343 393 IPR011598 GO:0046983
Mepo5g02944 415 FunFam Transcription factor bHLH130 family 338 408 - -
Mepo5g02944 415 Pfam Helix-loop-helix DNA-binding domain 343 388 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g02944 Mepo-Chr5 35984253 35987710 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo5g02944 HLH 2.2e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g02944 5 35984253 35987710 Mepo1g03551 1 41262181 41267572 ECH
Mepo5g02944 5 35984253 35987710 Mepo5g02944 5 35984253 35987710 ECH