Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01903 ATGCCCCCTAAAACCAGAGCCGAAACAATTGAAACATCGAGGAAAGAACTCACATCAGTTCAAGAGGATAAGGCCTCATTCCAAACTACAGAGGATTCAAAATCTCACACACCTTCATGCCAAGTTGAGAATCCGAAAACTCCCTCATTTGAAACAGAAACTTCTGAACAGAATTCCCATAAAATTGATGAACAAAGTGATATGTCACAAGACAAATCTCCAATGAAACCAGACATAATTGTTCCCTGTCCAAGATGCAAAAGCATGGACACAAAATTTTGTTACTATAACTGCCAGAGGTATTGGACTTCCGGAGGAGCCACGAGAAATATGATTGTAGGTGCAGGTCGTCGCAAGAACAAGCTCAATGCAGCCAATCGATTGCATAGTACTACTATCTTGACCTTTGGATTAGATTTTCCTATTATGTCTTCAACTTCACTTGCCACGAAAGTGAGTGTTGGACCAGATGATGAAACATTTGACAAGAGTAATCAGTGTTTTTTTCCACAACAGTTTCCGTGGAACCCCGCAATGTGTTATCCTGTGTCATTCTATCCCAATATAGCATACTATGGTGGCTGTTTGGTATTATCATGGAATGTACAATCTATCTCGACACAATCTTGTGATCAAAATTCAACTACATTAGGAAAACATTCAAGAGATGGGAACATTCTCTTGCATTCCAAATCAGAGAAAGAAAACCTTGGATCAGAGAGTAATAATAATAGTGTGTTGATCCCTAAGACACTGAGAATTGATGACACTAACGGAATTGCAAAGAGTTCTATATAG 798 0.3897 MPPKTRAETIETSRKELTSVQEDKASFQTTEDSKSHTPSCQVENPKTPSFETETSEQNSHKIDEQSDMSQDKSPMKPDIIVPCPRCKSMDTKFCYYNCQRYWTSGGATRNMIVGAGRRKNKLNAANRLHSTTILTFGLDFPIMSSTSLATKVSVGPDDETFDKSNQCFFPQQFPWNPAMCYPVSFYPNIAYYGGCLVLSWNVQSISTQSCDQNSTTLGKHSRDGNILLHSKSEKENLGSESNNNSVLIPKTLRIDDTNGIAKSSI 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01903 265 Pfam Dof domain, zinc finger 80 121 IPR003851 GO:0003677|GO:0006355
Mepo5g01903 265 MobiDBLite consensus disorder prediction 56 71 - -
Mepo5g01903 265 MobiDBLite consensus disorder prediction 1 76 - -
Mepo5g01903 265 PANTHER CYCLIC DOF FACTOR 2 13 265 IPR045174 GO:0003700|GO:0006355
Mepo5g01903 265 MobiDBLite consensus disorder prediction 22 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01903 Mepo-Chr5 20933322 20935070 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01903 53 265 C2C2-Dof Transcription Factor Family AT5G62430 39.592 2.99e-36 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mepo5g01903 zf-Dof 8.5e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01903 - - psat:127119499 332.413