Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01454 ATGTCACAAAATGAAACACAAACCTCAAAATCTCCAAAAGAAAAAAACATCAACAACAATAACCAACAAGGTTCTGGTGGTAAGAAAACAACCTCATCATCTTCTACCTCAACAACAAAACCACCAGAACAAAACATGAAGTGTCCTAGATGTGACTCACCCAACACAAAATTCTGCTACTACAACAACTATAGCTTAACACAACCAAGACATTTCTGCAAAACATGTAGAAGATATTGGACAAAAGGTGGAGCTTTACGCAACGTTCCAATCGGTGGTGGATGTAGAAAAAACAAGAAAATGAAATCATCATCATCAAGACTCTCTTGTGATTCAAAAGACTCAGCTTCTTCTTCTTCAGAGCTTGTTGGTGGCTTGAAATTCCTTCATTCTCTTTCTTCTCCTTCCATGGATTTTCATCTTGGTAATGGTTTATCTTTTCCAAGACTTCAACTTCATAATCACCCTCAAATTTCAACTACTCCTATGTATAACCAGTTTTCATCTTTTGGAGAAACTTCTTCTGCTATGAATAATAACTATCATGCTTCTTCAAATTCTGTTGCTGCTATGAACTATCCTTTTTCAACTGGTAATTATAATGGTGCAATACAAGGTATGAGTTCAATGAATATTAATCATAGCAATAATAATATTGCTTCTTCTATTGAATCTTTGAGTTCTATGAACCAAGACTTGCACTGGAAGCTACAGCAACAAAGATTATCTATGCTTTTTGGTGGTGGAGAAAATCAGAAAGATAATAACAATCTTCAGAATCAGACAGAGAAGCCACTACAACCCATTTTGTTTCAGAATCTTGAGGTTGCAAAGCAAGATGATAGAGCTTTTTCTGTTGGAAATTCAAGAACAAATGGTGGAGATACAGCAACTGAGTGGTTTTTTGGGAATTCTTATGGTTCTGCTGCTGCTACACCTACTGCAAGTGGTGGAGCTGGACATGATAGTGGAAGCAACTGGAATGGTGGTGGTGTTCATGGTTGGAGTGATGTGCAACAGCAATATAGTGCTTTGCCCTAG 1041 0.3708 MSQNETQTSKSPKEKNINNNNQQGSGGKKTTSSSSTSTTKPPEQNMKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKMKSSSSRLSCDSKDSASSSSELVGGLKFLHSLSSPSMDFHLGNGLSFPRLQLHNHPQISTTPMYNQFSSFGETSSAMNNNYHASSNSVAAMNYPFSTGNYNGAIQGMSSMNINHSNNNIASSIESLSSMNQDLHWKLQQQRLSMLFGGGENQKDNNNLQNQTEKPLQPILFQNLEVAKQDDRAFSVGNSRTNGGDTATEWFFGNSYGSAAATPTASGGAGHDSGSNWNGGGVHGWSDVQQQYSALP 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01454 346 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 23 246 IPR045174 GO:0003700|GO:0006355
Mepo5g01454 346 MobiDBLite consensus disorder prediction 92 116 - -
Mepo5g01454 346 ProSitePatterns Zinc finger Dof-type signature. 48 84 IPR003851 GO:0003677|GO:0006355
Mepo5g01454 346 MobiDBLite consensus disorder prediction 312 335 - -
Mepo5g01454 346 MobiDBLite consensus disorder prediction 1 48 - -
Mepo5g01454 346 ProSiteProfiles Zinc finger Dof-type profile. 46 100 IPR003851 GO:0003677|GO:0006355
Mepo5g01454 346 MobiDBLite consensus disorder prediction 1 44 - -
Mepo5g01454 346 Pfam Dof domain, zinc finger 44 100 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01454 Mepo-Chr5 15229952 15231124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01454 12 346 C2C2-Dof Transcription Factor Family AT5G65590 41.983 8.71e-67 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mepo5g01454 zf-Dof 1.6e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01454 - - gmx:100780729 358.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01454 5 15229952 15231124 Mepo1g02479 1 25978599 25980191 PCT