Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00935 ATGGCTGGTTTATTTTCATTAGGAAGAACTGAAGAAGAAAACCAACAGAATAATAATCCAACAACAGAATTCTGGTATAATAAGAATGATGATTCTGTTGTTTCTTCATACCGTGGTTTTGAGATTTGGAACCAACATCCTCATGATCAACAACAACAGTTGTTTTCTTTACAACAACCTCAGCAACAAGATCTTTACTCCTCTGGTGTTGTGTTAGGAGTGGGACCTACTAGGGTTTGTTCTTCTGATGAGAATAGATCTGCTGTGTTTGTAGGAAGTGGAAGTGGGGGTATAAGTTGTCAAGATTGTGGGAATCAAGCTAAGAAAGATTGTCCTCATATGAGATGTAGAACTTGTTGTAAAAGTAGAGGTTTTGATTGTCAAACTCATGTTAAGAGTACTTGGGTTCCTGCTGCTAGAAGAAGAGAAAGACAACAACAACTTTCTGCTCCTAAATCATCACAACAACATGGAGATATTGTTCCTGAAACTAGACACAGAGATCTTAACAATAACAATTCCTCTTTAGCTTGCACTCGTTTACCTACAAACCCTTCACTCACTCTCCCCCCTTCAGCAGGGTTATTAGAGGAGATGAATTTTCCAGCTGTGGTGAATTCTCCAGCAGAGTTCAGGTGTGTGAGAGTTAGCTCAGTTGATGAGAACGAAGAGGAGTATGCATATTCAACAGCTGTAAACATTGGAGGGCATGTTTTTAGAGGAATTCTGTATGATTATGGTCCAGATCATGGGAATAATAGTTACAATATGGCTGCCGGAAACGCCTCCAATTCTAGTGGTACAGCCCTTGAAGGGGTGGTTGAACCTTTGAACCTTATCTCAGGTGTCCCTGCTACTGGTGTTGGGGAAATTGTTGATCCTTCTTCTTCTTTGTATCCAGCTCCACTTAATACCTTCATGCCTTCTAGTGGTACGCAATTCTTCCCCCACCCAAGATCTTGA 963 0.4071 MAGLFSLGRTEEENQQNNNPTTEFWYNKNDDSVVSSYRGFEIWNQHPHDQQQQLFSLQQPQQQDLYSSGVVLGVGPTRVCSSDENRSAVFVGSGSGGISCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVPAARRRERQQQLSAPKSSQQHGDIVPETRHRDLNNNNSSLACTRLPTNPSLTLPPSAGLLEEMNFPAVVNSPAEFRCVRVSSVDENEEEYAYSTAVNIGGHVFRGILYDYGPDHGNNSYNMAAGNASNSSGTALEGVVEPLNLISGVPATGVGEIVDPSSSLYPAPLNTFMPSSGTQFFPHPRS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00935 320 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 304 IPR007818 GO:0003700|GO:0006355
Mepo5g00935 320 MobiDBLite consensus disorder prediction 9 23 - -
Mepo5g00935 320 NCBIfam LRP1 C-terminal domain 201 248 IPR006511 -
Mepo5g00935 320 MobiDBLite consensus disorder prediction 1 23 - -
Mepo5g00935 320 NCBIfam putative zinc finger domain, LRP1 type 99 141 IPR006510 -
Mepo5g00935 320 MobiDBLite consensus disorder prediction 167 183 - -
Mepo5g00935 320 MobiDBLite consensus disorder prediction 138 183 - -
Mepo5g00935 320 Pfam Domain of unknown function (DUF702) 97 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00935 Mepo-Chr5 9076103 9077647 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Mepo5g00935 DUF702 4.3e-64 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07891 3 91919205 91920917 Mepo5g00935 5 9076103 9077647 ECH
Mepo2g02361 2 33397118 33398732 Mepo5g00935 5 9076103 9077647 ECH
Mepo5g00935 5 9076103 9077647 Mepo5g00935 5 9076103 9077647 ECH