Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04761 ATGGCAGATAACAGTCAAAAGACAGAAGATACTTCAACAGAAGATGTTGACACTGATGATAAAAACAACCAATGTTTATCAACCGTGTCTTGGTGCAATGGTGTTGGGAATGGGGCTCTAGTAGTTGTTGACTCCAAGGATCAATGCAAGACTAAGGGTCCAGCTGAAGAGCACAAGACTCTTCGTCGGCTGATGCAGAATCGCGAGGCTGCAAGGAAAAGTAGGTTAAGGAAGAAGGCATATGTGCAACAATTGGAGAACAGTCGACTTAGGCTTGCTCAAATAGAACAAGAGCTTCAACAAGTACGTCAACAGGGTGCATTTGTTGCAACCGGAGTTACGGCAGATCATGGTCATTCAATTGTTGGAAACAGTCTGGTAGCATTTGATATGGACTATGCCCGTTGGGTCGATGATCATCAACTACTAATCAATGACATAAGATCAGCTATAAATTCTCAAATGGGCGATAATGAACTGCATCTTCTTGTTGAAGGTGTCATGTCACATTATGATGAATTATACAAGTTGAAGAGCATAGGTGCAAAGGCTGATGTATTTCACATACTTTCTGGGCTGTGGAAGACACCTGCAGAAAGATGTTTCATGTGGCTCGGTGGATTCCGTTCTTCCGAACTTCTCAAGATTGTTAGAAACCACCTTGAGCCGTTATCGGATCAGCAGTTGATGGGGATCTACAATCTGCAGCATTCTTCTCAGCAAGCTGAGGATGCTTTATCTCAAGGAATGGAAGCATTACAACAATCTCTTTCAGAGACACTTTCCTCCACATCCACTGGATCTGGAAATGTTGCCGAGTACATGGGCCAAATGGCTCTTGCAATGGCCAAGCTTGCCACACTAGAGACTTTCATTCATCAGGCTGATCTCTTGAGACAACAAACACTGCAACAGTTGCGTCGAATTTTGACCGCGCACCAAGCTGCTCGCGCTCTCCTTGTCATAAATGATTTCATTTCGCGAATTCGAGCTCTTAATTCATTATGGTTAACATGTCCTAAAGAATACTAA 1032 0.4331 MADNSQKTEDTSTEDVDTDDKNNQCLSTVSWCNGVGNGALVVVDSKDQCKTKGPAEEHKTLRRLMQNREAARKSRLRKKAYVQQLENSRLRLAQIEQELQQVRQQGAFVATGVTADHGHSIVGNSLVAFDMDYARWVDDHQLLINDIRSAINSQMGDNELHLLVEGVMSHYDELYKLKSIGAKADVFHILSGLWKTPAERCFMWLGGFRSSELLKIVRNHLEPLSDQQLMGIYNLQHSSQQAEDALSQGMEALQQSLSETLSSTSTGSGNVAEYMGQMALAMAKLATLETFIHQADLLRQQTLQQLRRILTAHQAARALLVINDFISRIRALNSLWLTCPKEY 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04761 343 SMART brlzneu 55 108 IPR004827 GO:0003700|GO:0006355
Mepo4g04761 343 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 57 101 IPR004827 GO:0003700|GO:0006355
Mepo4g04761 343 MobiDBLite consensus disorder prediction 1 20 - -
Mepo4g04761 343 Pfam bZIP transcription factor 56 95 IPR004827 GO:0003700|GO:0006355
Mepo4g04761 343 SUPERFAMILY Leucine zipper domain 59 101 IPR046347 GO:0003700|GO:0006355
Mepo4g04761 343 Coils Coil 78 105 - -
Mepo4g04761 343 Pfam Seed dormancy control 144 218 IPR025422 GO:0006351|GO:0043565
Mepo4g04761 343 PANTHER TRANSCRIPTION FACTOR TGA9 14 342 - -
Mepo4g04761 343 ProSiteProfiles DOG1 domain profile. 126 339 IPR025422 GO:0006351|GO:0043565
Mepo4g04761 343 FunFam BZIP family transcription factor 58 107 - -
Mepo4g04761 343 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 62 77 IPR004827 GO:0003700|GO:0006355
Mepo4g04761 343 Gene3D - 59 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04761 Mepo-Chr4 57062419 57064869 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04761 33 342 bZIP Transcription Factor Family AT1G68640 67.412 1.94e-144 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mepo4g04761 DOG1 8.7e-29 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04761 4 57062419 57064869 Mepo4g04761 4 57062419 57064869 ECH