Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04752 ATGCCCACCGAGTCTCGACGCAAGCATCGCCGATCACCTTCTCCCGATGACCACGACAAATCCTCCAAACGTCACAAACACCGCCACCGTCACCGCCACCACAGCAGCAAAAAACGCGACGAAGAAGAGATTCAATTCGATGCTGAAACCGTTGATTCCGTGAAGATCAATCATCTCCCTGTTGATGATGTAGAGGAGGGAGAGATTCTCGACGACGAGCCTTTCGAGGTCAAAGATGATGCAGATCTTCGATCTCTTAACAAAAATCCGGGACTTCCCGCTAAAAGTTCAGAAACTGAACGTGAGGACATCAGCAACGACAGATTTATTAATCATACTTCTGATGAAGATGGGAAACTGCGTCAGAGCTCCCACATTGATACTCGAATTAATGACGACGATGATTCTCCATACAACTCAAGAGCTGAAACTCAAACTAGGAGGGATGTTCGAGCTGGTACTGATGCTCTGGGCAATGGGCATCTGGGTGATAAGTCTTCCAAAGGGGATAAGTGGAAGAACGGGGAGTTTGGTCATTTTAGAGGAAATGTGAAACTTGAAGGTGACAATGATGACGACGACGCACTGGAGGCTAATAGAAGGGAAGTAAATCCCCACAGGAATTCCTCTGAAAGTAGAGAAGAAAAACACAGAATGTCAGCGAATTCTCCTTTGCATGATGGACACAGAAGTCGATCAAGATCAATTGGTCATACAAGGGACAGGTCTCGTTCTCGTAGTGTAGTAGAAGAGCATGCTCGTCCCAAGAACAGGCACTCTGTGGAACGAGGATCCCTTTATTATACCAGCAGACACAAGGTTGACTATGACCTTGATGAGGAAACAGTGAGGGCAGGAAGAAGGGAGCATCGTCACGGCAGTAAGGATCTGATGGAAGATGATAGACGAGAACGCAGTTCTAGGTATCACAGTCGGGAGGCCCGGGATAAGGACAGGAACAAGGATATGGATAAGGATAGGAGTCGGGACCGAGATGTGGATAGAGACTTGCATAGGGAAAAGAAGCGAGAGGAAACAAGCAGGAATAAGGAGGTTGATTGGGTGCATAGAAGGGAAAAAGAACGTGGAAGGAGTCATGACAGGCATAGAAGGGACATGGTAAAAGATAGGAGCAGGGAAAGGGATGAGGGTAGGGATAGGAGAAGAGAAATGGAAAGAGGTAGGAGCAGGGACACAGTTTATGAGAGGGATAGGAGAAGGGAAACTGAAAGAGATATGAGCAGGGACAGAACAAGGGGTGGTGAGAGAGATAGAGACTGGAAGAGTGAATGGGATTATAGGAACCGGGAAAGGGATATCAATAAGGAGAGACGAGATGACAGATATCGGCACAACGATGAAGACGCTCCTAATGGTAAGGATAAGCATATGCGTCGCGAGGATGATAATGACAGCGGAGATAGATATAAAAAACATTCAAGACATGAAGAAAATGGATACCATGCAGATAGAAAGAGAAACTATACCATGGAAGAGGATGGAAGGAAACTAAAAGGCAGCGAGGTTGAACAAGATGATGTAGATGAGGATACATTGGAATTACCTGATCAGGAAGAGGAAGATCTGATCAGAATCAAAGAGGAGAGTAGAAGAAGAAGAGAAGCAATAATGGAGAAATACAAGAAGCAGAATCAGCAAATAGAACAAGCAGCTGAAAATGAAGGAAAAGACAAGGACATGGAGATTCACACTGACATTTCTAAAGCAATTGATGGCAAGAGTGATGATGTGGAACCATCATTTTCTGTTGGGAAATCTCCACCTGAAAATGTGGATGTTGGGTCAGAGAAGGTACCTGGTGCTGGTGGCCTAGGCGAGGGTACTCCAAAGAGTGATAGGTCAGCTGACAAGTATTGTGATGATATATTTGGTGAGACACCAACTGGAGTTCGGAAATCAGGAAAAGAAGATGGGTTATTGATTGAGAGGGCCGGTCTGCATGACAATTGGGATGATGCAGAGGGCTATTACAGCTATCGTTTTGGTGAAATACTTGATGGCCGATATGAAGTTACTGCTGCACATGGGAAGGGTGTCTTTTCAACAGTTGTACGAGCTAGGAATCTAAAAGCTGGTAATGGTGAGCCAGATGAAGTAGCAATAAAAATTATTCGCAATAACGACACTATGTACAAGGCTGGTTTGGATGAATTAGTCATTTTGAAGAAATTAGTAGGTGCAGATCCGGATGATAAACGTCATTGTGTTCGTTTCCTTTCAAGCTTTAAGTACAGAAATCATCTATGTTTAGTTTTTGAATCTCTAAATATGAATCTTCGTGAGGTTTTAAAGAAGTTCGGTCGCAATATTGGCCTTAGGCTAACTGCTGTGAGGACATATGCAAAACAGCTTTTTATTGCACTGAAGCATCTCCGTAACTGTGGTGTTCTGCACTGTGATATAAAGCCCGATAACATGTTGGTGAACGAGGCTAAAAATGTTTTGAAGCTTTGTGACTTTGGTAATGCCATGTTTGCTGGTAAAAATGAAGTGACACCATATCTTGTGAGTCGCTTTTATCGTGCTCCTGAAATAATTCTTGGCTTGCAGTATGATCATCCATTGGATATTTGGTCTGTAGGCTGTTGTTTGTATGAACTGTATACAGGGAAGGTTCTTTTTCCAGGGCTCACAAACAATGACATGTTGCGGCTTCACATGGAATTGAAGGGCCCTTTTCCAAAAAAGATGCTCCGTAAGGGAGCATTTACTGGACAGCATTATGACCAAGACTTAAGTTTTCATGCCACTGAAGAGGATCCTGTAACAAAAAAGACCATAAAGCGGATGATTCTTAACATAAAGCCGAAAGATATTGGAACAATCGTTGCTGGCTCTTCTGGGGAAGACCCAAAAATGTTGGCCAATTTTAAAGATATTCTAGATAAAATTTTCGTCTTGGATCCGGACAAGCGTTTGACAGTCTCACAAGCATTGAACCACCCATTCATCACTGGCAAGTGA 2985 0.4365 MPTESRRKHRRSPSPDDHDKSSKRHKHRHRHRHHSSKKRDEEEIQFDAETVDSVKINHLPVDDVEEGEILDDEPFEVKDDADLRSLNKNPGLPAKSSETEREDISNDRFINHTSDEDGKLRQSSHIDTRINDDDDSPYNSRAETQTRRDVRAGTDALGNGHLGDKSSKGDKWKNGEFGHFRGNVKLEGDNDDDDALEANRREVNPHRNSSESREEKHRMSANSPLHDGHRSRSRSIGHTRDRSRSRSVVEEHARPKNRHSVERGSLYYTSRHKVDYDLDEETVRAGRREHRHGSKDLMEDDRRERSSRYHSREARDKDRNKDMDKDRSRDRDVDRDLHREKKREETSRNKEVDWVHRREKERGRSHDRHRRDMVKDRSRERDEGRDRRREMERGRSRDTVYERDRRRETERDMSRDRTRGGERDRDWKSEWDYRNRERDINKERRDDRYRHNDEDAPNGKDKHMRREDDNDSGDRYKKHSRHEENGYHADRKRNYTMEEDGRKLKGSEVEQDDVDEDTLELPDQEEEDLIRIKEESRRRREAIMEKYKKQNQQIEQAAENEGKDKDMEIHTDISKAIDGKSDDVEPSFSVGKSPPENVDVGSEKVPGAGGLGEGTPKSDRSADKYCDDIFGETPTGVRKSGKEDGLLIERAGLHDNWDDAEGYYSYRFGEILDGRYEVTAAHGKGVFSTVVRARNLKAGNGEPDEVAIKIIRNNDTMYKAGLDELVILKKLVGADPDDKRHCVRFLSSFKYRNHLCLVFESLNMNLREVLKKFGRNIGLRLTAVRTYAKQLFIALKHLRNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMFAGKNEVTPYLVSRFYRAPEIILGLQYDHPLDIWSVGCCLYELYTGKVLFPGLTNNDMLRLHMELKGPFPKKMLRKGAFTGQHYDQDLSFHATEEDPVTKKTIKRMILNIKPKDIGTIVAGSSGEDPKMLANFKDILDKIFVLDPDKRLTVSQALNHPFITGK 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04752 994 Gene3D Phosphorylase Kinase; domain 1 646 735 - -
Mepo4g04752 994 ProSiteProfiles Protein kinase domain profile. 676 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04752 994 Pfam Protein kinase domain 678 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04752 994 ProSitePatterns Serine/Threonine protein kinases active-site signature. 803 815 IPR008271 GO:0004672|GO:0006468
Mepo4g04752 994 SUPERFAMILY Protein kinase-like (PK-like) 663 993 IPR011009 -
Mepo4g04752 994 MobiDBLite consensus disorder prediction 1 21 - -
Mepo4g04752 994 MobiDBLite consensus disorder prediction 442 510 - -
Mepo4g04752 994 MobiDBLite consensus disorder prediction 578 623 - -
Mepo4g04752 994 MobiDBLite consensus disorder prediction 442 533 - -
Mepo4g04752 994 PANTHER DUAL SPECIFICITY PROTEIN KINASE 357 992 - -
Mepo4g04752 994 MobiDBLite consensus disorder prediction 95 150 - -
Mepo4g04752 994 Coils Coil 533 564 - -
Mepo4g04752 994 MobiDBLite consensus disorder prediction 1 426 - -
Mepo4g04752 994 FunFam Serine/threonine-protein kinase PRP4 homolog 736 992 - -
Mepo4g04752 994 MobiDBLite consensus disorder prediction 164 426 - -
Mepo4g04752 994 SMART serkin_6 676 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04752 994 Gene3D Transferase(Phosphotransferase) domain 1 736 992 - -
Mepo4g04752 994 CDD STKc_PRP4 675 991 IPR044092 GO:0004674|GO:0006468|GO:0045292
Mepo4g04752 994 FunFam serine/threonine-protein kinase PRP4 homolog 647 735 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04752 Mepo-Chr4 57004210 57010522 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04752 683 988 Core Cell Cycle Gene Families AT1G66750 29.968 1.79e-26 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Mepo4g04752 Pkinase 7.8e-47 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04752 4 57004210 57010522 Mepo4g04752 4 57004210 57010522 ECH