Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04736 ATGACTTGTTCAAGTAAAAACGTAGCAAACGCTGTTGGAGGCAAAACTGCTAGGGCTTGTGACAGTTGCATAACAAAGAGAGCACGTTGGTATTGTGCTGCTGATGATGCTTTTCTCTGTCAAGCTTGTGACTCTTCTGTTCATTCAGCTAATTCTTTAGCTCGAAGACATGAAAGAGTTCGTTTGAAAACAGCATCGTACAAGTCCATTAATGATGATGAATTCTTCAATTGTGGTCCTTTTTCTGGCTTCACCAAGAAAGCTAGAACACCAAGGCAGGGGAAACACAAATCAAAATCATCCTCGAGCAACGAACCGGAGGGGAATAATAATAATAATAATAATAATCCGTTTCATCTTGTGCCGGAATTAGGTTTGGATGAAGTTAATTCAAATTCACATGACGAAAATGAGGCGCAACTTCTTTACAGGGTACCAATTTTCGATCCTTCTATTGCTGATTTATGTACTAGTCCTCCTTCAGTTGGTTCAACTGAAGGAGGACCGGGAATGGTAGTTGTTGCTTCTGCTTTCGCTCCTGATGTTAAAAACAATGAGAGCGAAAGCAGAGTTCACCTAAGTGGTGATAACAATTATGAGATGGAAAGCTTTCACGGGCTTCTTCCATCTGATATTGAATTAGCCGAATTTGCAGCTGATGTTGAGAGCTTATTGGGTAGGGGATTAGAAAATGAGTGTATAGGGATGGAAGAGTTGGGATTGATTGATACAAAGCATGAGGAGAGTGAGAAGTGGAAGTGTAGTGGAAAGGTGAAGGAAGAAGGTGAAGAGAGCTATGAAATTGTTGAGGGAGATAACATGATGGAGATTGGAAAAGAATCTTCATTTGAGTTGAATTTTGATTATGATGATTCTCATGAAACATGTGATGAGGTGAAGGAGAAGTGTGGAGAACAAAATGAAAATAATGATTATAATAAGGGGAAAAGAAAAATATCTTTGCAGCTAGATTATGATGCAGTAATCATTGCATGGGATAGCCAAAAGTGTCCCTGGACTAATGGTGACAAGCCAAATTTGGATGCTGATGAAAACTGGCCTGATTGCATGGGAACTTTTGGAACGGAGGTTCATTATGCTTATGGTGAGTTTGGAGGATATGGATGTAATCAAGTAATGGTAGATGGAGGCAGAGAGGCAAGGGTTTCGAGGTACAGAGAAAAGCGAAGAACAAGGTTGTTCTCAAAGAAAATAAGGTACGAGGTTAGGAAATTGAATGCAGAGAAGAGACCAAGAATGAAAGGGAGATTTGTGAAGAGGGCTTCCTTTGCAGTTCCAACATTTCCTTTGCTAAAATAA 1320 0.3985 MTCSSKNVANAVGGKTARACDSCITKRARWYCAADDAFLCQACDSSVHSANSLARRHERVRLKTASYKSINDDEFFNCGPFSGFTKKARTPRQGKHKSKSSSSNEPEGNNNNNNNNPFHLVPELGLDEVNSNSHDENEAQLLYRVPIFDPSIADLCTSPPSVGSTEGGPGMVVVASAFAPDVKNNESESRVHLSGDNNYEMESFHGLLPSDIELAEFAADVESLLGRGLENECIGMEELGLIDTKHEESEKWKCSGKVKEEGEESYEIVEGDNMMEIGKESSFELNFDYDDSHETCDEVKEKCGEQNENNDYNKGKRKISLQLDYDAVIIAWDSQKCPWTNGDKPNLDADENWPDCMGTFGTEVHYAYGEFGGYGCNQVMVDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRASFAVPTFPLLK 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04736 439 MobiDBLite consensus disorder prediction 103 119 - -
Mepo4g04736 439 SMART bboxneu5 15 62 IPR000315 GO:0008270
Mepo4g04736 439 CDD Bbox1_BBX-like 19 62 - -
Mepo4g04736 439 ProSiteProfiles CCT domain profile. 385 427 IPR010402 GO:0005515
Mepo4g04736 439 Pfam B-box zinc finger 17 60 IPR000315 GO:0008270
Mepo4g04736 439 Pfam CCT motif 385 427 IPR010402 GO:0005515
Mepo4g04736 439 ProSiteProfiles Zinc finger B-box type profile. 15 62 IPR000315 GO:0008270
Mepo4g04736 439 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 10 428 - -
Mepo4g04736 439 MobiDBLite consensus disorder prediction 86 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04736 Mepo-Chr4 56808604 56810810 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04736 6 427 C2C2-CO-like Transcription Factor Family AT1G25440 44.495 5.17e-103 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Mepo4g04736 zf-B_box 9.8e-08 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04736 4 56808604 56810810 Mepo4g04736 4 56808604 56810810 ECH