Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04709 ATGGATAACAACCACCATGATCATGATCATTACAATACTAAAACAACAAACCCAACTTCCCAAACACACCTTAAGCTCTTTGGTTTCAGCTTCCATGAAGATGAAACCATGCATGATATTCAAGACTCAACAACAACAACAACCAAAACAACTTCTTCTTCCACCTCAACTTCACCATCAAGATCACCAGACTCCTCCGGTATCAACGAAACTTTCCCACCTTCCTCCGGTGAAAGAAAATACGAGTGTCAATATTGTTGCAGAGAGTTTGCAAATTCACAAGCCCTTGGTGGACACCAAAACGCTCACAAAAAGGAACGTCAACAACTCAAACGTGCTCAGTTACAAGCTAACCGAAACGCCGCCGTGTCCTTCGTTCGAAACCCTATCATCTCCGCCTTTGCCCCTCCGCAACACTTGCTAGCTCCGCCAGGTTCCATGATGGTTCCAGCTTCTCCATCCTCTTGGGTTTACGTTCCACCCCGTTCCGCTCCACCTCCGTTCCACGTCTCAGTTTCACACGGTTGCGTTTTCCCGTCGGGGAACGGAAACACCATGATGAGTAGTAGTAATAATAATAGTAACATGATGAAACCTGTGGGTGCAGGGATGTTTCCATGTGTTGGCGTTGTAGGGGATTCAACGTCCACATTGTCAACGATGCAGGTTCAGGCCCGGGCCCACAATGTAAGGATTGATGGGCCATGTTTGAGTAGGTTCTCAAAAGGTGATAGTGGGCCCAATTTTGATGATGCATTGGGCTTAGATTTGCACCTTAGTCTTGCGCCAGCTGCAAATCGATCACGCGGCTCGGCTCAGCTTGGTTATTCTAGATGCTCCCCTTAA 846 0.4728 MDNNHHDHDHYNTKTTNPTSQTHLKLFGFSFHEDETMHDIQDSTTTTTKTTSSSTSTSPSRSPDSSGINETFPPSSGERKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQANRNAAVSFVRNPIISAFAPPQHLLAPPGSMMVPASPSSWVYVPPRSAPPPFHVSVSHGCVFPSGNGNTMMSSSNNNSNMMKPVGAGMFPCVGVVGDSTSTLSTMQVQARAHNVRIDGPCLSRFSKGDSGPNFDDALGLDLHLSLAPAANRSRGSAQLGYSRCSP 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04709 281 ProSiteProfiles Zinc finger C2H2 type domain profile. 81 108 IPR013087 -
Mepo4g04709 281 PANTHER ZINC FINGER PROTEIN 5 13 265 IPR044299 GO:0010090
Mepo4g04709 281 MobiDBLite consensus disorder prediction 41 73 - -
Mepo4g04709 281 FunFam Zinc finger protein 6 70 131 - -
Mepo4g04709 281 ProSitePatterns Zinc finger C2H2 type domain signature. 83 103 IPR013087 -
Mepo4g04709 281 MobiDBLite consensus disorder prediction 1 22 - -
Mepo4g04709 281 MobiDBLite consensus disorder prediction 39 77 - -
Mepo4g04709 281 Gene3D Classic Zinc Finger 64 128 - -
Mepo4g04709 281 SUPERFAMILY beta-beta-alpha zinc fingers 77 108 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04709 Mepo-Chr4 56545585 56546629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04709 16 266 C2H2 Transcription Factor Family AT1G68360 43.704 2.20e-49 162
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04709 4 56545585 56546629 Mepo4g04709 4 56545585 56546629 ECH