Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04708 ATGGATCAAAAGATGGAAGGAACGTCTGCACCAGCAATTCGACGTGACCCTTACGAGGTTTTGTCTGTTTCTAAGGAATCATCCGATCAGGAAATTAAAACCGCTTACAGAAAACTTGCTCTCAAGTATCACCCTGACAAGAATGCCAACAATCCTGAAGCTTCAGAACTATTCAAAGAGGTTGCATATTCTTATAATATCTTATCCGACCCAGAAAAGAGAAGGCAGTATGACAGTGCAGGATTTGAGGCACTTGATGCTGATAGCATGGACATGGAAATCGATTTATCTAATCTTGGGACTGTGAACACAATGTTTGCAGCTTTATTCAGCAAGCTGGGTGTCCCAATCAAGACTACCATTTCGGCTAATGTTCTTGAAGAAGCTTTGAATGGCACTGTTACAGTCAGACCCCTTCCAATCGGAACATCTGTTAGTGGAAAGGTAGAGAAGCAATGTGCTCATTTTTTTGGTGTGACAATAAATGAGCAGCAAGCTGAGTCCGGGATTGTAGTAAGAGTTACTTCAACTGCACAAAGCAAATTCAAGTTGCTCTATTTCGAACAAGATGCAAACGGGGGCTATGGTTTAGCATTGCAGGAAGATAGTGAGAAGACTGGCAAGGTGACATCTGCTGGAATGTATTTCTTACATTTTCAAGTGTACAGAATGGATTCAACTGTGAATGCGTTAGCGATGGCCAAGGACCCTGAAGGGGCTTTCTTTAAAAGGTTGGAAGGTCTTCAACCTTGTGAAGTTTCGGAACTAAAGCCTGGCACACATATATTTGCCGTTTATGGTGATAACTTCTTTAAGACTGCTAGCTATACAATTGAAGCAGTATGTGCAAAATCACATGAAGATACCACCCAAAAACTTCAGGATATTGAGGCTCAAATTTTAAGAAAGAGGAATGAGCTACGACAATTCGAATCAGAATATAGAAAGGCATTGGCACGCTATCAGGAAGTGACAGACAGATACACAAAAGAAAAACAGTCTGTAGATGAGCTTCTGAAACAAAGGGACGGTATCCATTCTACCTTCACCATTGTCAAGCCAACCAATACTAGTGGAAGTGGCAGTAATTTAAGCAATGGAAGTTCTAGCAAAATTTCTGGTGAAGATTCCAAAGGTGAGAGCCCTGGGGAAGATGGAGGGTCAGATGGTAAGGATAAATCAGGCAAAAAGAAATGGTTCAACCTCAATCTTAAGGGCTCGGGTTCTGATAAGAAGTTGATTTAA 1245 0.4129 MDQKMEGTSAPAIRRDPYEVLSVSKESSDQEIKTAYRKLALKYHPDKNANNPEASELFKEVAYSYNILSDPEKRRQYDSAGFEALDADSMDMEIDLSNLGTVNTMFAALFSKLGVPIKTTISANVLEEALNGTVTVRPLPIGTSVSGKVEKQCAHFFGVTINEQQAESGIVVRVTSTAQSKFKLLYFEQDANGGYGLALQEDSEKTGKVTSAGMYFLHFQVYRMDSTVNALAMAKDPEGAFFKRLEGLQPCEVSELKPGTHIFAVYGDNFFKTASYTIEAVCAKSHEDTTQKLQDIEAQILRKRNELRQFESEYRKALARYQEVTDRYTKEKQSVDELLKQRDGIHSTFTIVKPTNTSGSGSNLSNGSSSKISGEDSKGESPGEDGGSDGKDKSGKKKWFNLNLKGSGSDKKLI 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04708 414 MobiDBLite consensus disorder prediction 377 399 - -
Mepo4g04708 414 Gene3D DnaJ domain 3 98 IPR036869 -
Mepo4g04708 414 MobiDBLite consensus disorder prediction 350 414 - -
Mepo4g04708 414 Pfam DnaJ domain 16 78 IPR001623 -
Mepo4g04708 414 FunFam Chaperone protein dnaJ 16 1 98 - -
Mepo4g04708 414 CDD DnaJ 16 70 IPR001623 -
Mepo4g04708 414 SMART dnaj_3 15 73 IPR001623 -
Mepo4g04708 414 PRINTS DnaJ domain signature 53 73 IPR001623 -
Mepo4g04708 414 PRINTS DnaJ domain signature 73 92 IPR001623 -
Mepo4g04708 414 PRINTS DnaJ domain signature 18 36 IPR001623 -
Mepo4g04708 414 PRINTS DnaJ domain signature 36 51 IPR001623 -
Mepo4g04708 414 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 3 407 - -
Mepo4g04708 414 Coils Coil 286 341 - -
Mepo4g04708 414 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Mepo4g04708 414 ProSiteProfiles dnaJ domain profile. 16 81 IPR001623 -
Mepo4g04708 414 MobiDBLite consensus disorder prediction 350 376 - -
Mepo4g04708 414 SUPERFAMILY Chaperone J-domain 15 86 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04708 Mepo-Chr4 56528717 56534447 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04708 7 88 C2H2 Transcription Factor Family AT1G74250 43.678 8.75e-14 71.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04708 4 56528717 56534447 Mepo4g04708 4 56528717 56534447 ECH