Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04665 ATGCTAGAATTTCGTAGCAATCTCCCTGCTTATAAAGAGAAAGAAGCAATATTATCAGTCATATCAAAGAATCAGGTAGTCATCATTTCAGGTGAAACAGGTTGTGGCAAGACAACACAAATTCCACAATTTATTTTGGAGTCTGAGATAGAATCAGTTCAAGGAGCTGCTTGTAATATTATATGCACGCAGCCAAGACGAATTTCAGCCATTTCTGTTTCGGAAAGGGTTGCTTTTGAGAGAGGGGAGAAATTGGGCGAATCTATTGGATATAAAGTTCGACTGGAGGGAATGAAAGGGAGGGATACCCATCTTCTCTTTTGCACTACGGGCATCTTATTAAGAAGATTACTGGCTGATAGAAACCTCAAAGGCGTAACTCATGTTATTGTGGATGAAATTCATGAACGTGGGATGAATGAAGATTTTCTGCTTATTGTCCTTAAAGAACTCCTTCCCCATCGGCCCGAACTCAAACTGATTTTGATGAGTGCTACCCTAGATGCAGAGCTCTTCTCTTCGTACTTTAATGGGGCTCCAATAGTGAACATACTGGGCTTTACACACCCTGTTAGAACTCTTTTTTTGGAGAACATTCTTGAAATCACGGGCTATCGATTGACTCCTTCTAATCAAATTGATGATTATGGTCAAGAAAGGGCTTGGAAAATGAACAAACAGGCCCCAAGAAAGAGGAAAAGCCAAATTGCTTCTGCTGTAGAGGATGCAATTAGATCTGCTGACTTCAGAGAGTACAGCCTTCAGACACAGGAGTCTTTGTCATGCTGGAATCCTGACTGTATTGGTTTTAGTCTCATAGAATATATCCTGTGTGATATTTGTGAGAATAAAAGGCCTGGTGCTGTTCTGGTTTTCATGACTGGGTGGGATGATATAAGCTCTCTGAAAGAGAAGCTCCAAACACATTATGTCTTGGGAGATCTGAAGCGTGTTTTGTTGCTTACATGTCATGGCTCAATGGCTAGCTCAGAGCAAAAGTTAATATTTGAAGAGCCTGGAGATGGAGTAAGAAAAGTAGTGCTAGCAACAAATATTGCTGAAACGAGTATCACAGTAGATGATGTTGTTTTTGTCCTGGACTGTGGAAAAGCAAAAGAAACATCATATGATGCACTGAATAACACACCTTGTTTGCTTCCTACATGGATCTCTAAGGCTTCTGCTCATCAAAGAAGAGGAAGAGCCGGTCGTGTTCAACCTGGAGAGTGTTACCATCTTTATCCTAGATGTGTATATGATGCTTTTGCAGAGTATCAATTGCCAGAAATTTTGAGAACACCTTTGCAGTCTCTCTGTTTACAAATCAAAAGTCTAAGACTTGGAAGTATATCTGATTTCTTGTCTAGGGCTTTGCAGTCTCCTGAGATACTGGCGGTACAAAATGCAGTTGAATATTTAAAAATAATTGGGGCTTTGGATGAGAATGAGAATCTGACTACTCTAGGAAGCTATTTGACAATGCTTCCTATGGAACCCAAACTTGGAAAGATGCTTATATTAGGGGCTATCTTCAATTGCTTGGGTCCTATATTAACTGTTGTTGCTGGACTTAGCGTAAGAGATCCTTTTCTTACACCACTGGATAAAAAAGATCTTGCAGAGGCAGCAAAATCTCAATATGCGGGTGCATACAGTGACCACCTAGCACTTGTACGTGCCTATGCGGGTTGGAAAGAGGCTGAGATTGACCTGGTTGGATATGAATATTGCTGGAAAAACTTTCTGTCATTCCAATCCATGAAGGCTATTGATGCTCTTCGAAGGGAATTCATAGGGCTGCTTACGGATATTGGATTAGTTGATTGCAATACAACCAGCTGTGACACATGGAGCTATGATGTGAATCTTATCCGGGCAGTTATTTGCTATGGTCTGTACCCTGGAATTTGTTCTGTGGTGCATAATGAGAAGTCATTTGCTTTGAAAACAATGGAGGATGGTCAAGTTCTCTTATACTCGAACTCGGTCAATGCTCGAGAAACAAGAATTCCATATCCGTGGTTAGTTTTTAATGAGAAGATAAAAGTGAACTCCGTTTTTCTCCGTGACTCAACAGCTGTCTCTGATTCAATGATGCTTTTGTTTGGTGGAAGCTTATCAAAAGGAGATGCTGATAATCATTTAAAAATGTTAGGAGGATATCTGGAGTTTTTCATGGAACCTACTGTTGCTGATATGTATCAAAGTATAAGGAGAGAACTTGATGACTTCATTCAGAGCAAACTACTTTCTCCAAGAATGAGCATACACTCATATCATAACCTCCTATCTGCGGTACGTTTTCTGATTTCCCACGACTCATGTGAAGGAAGATTTGTATTTGGTCGTCAAGTCCTTAAACCATCAAATATATCTGTGATGGCCCCACACCAAGCATCCTTGGTTCCAAGAACAGAGAGTGGACCTGGGGGTGATAATTCTAAAAGTCAGCTCCAAACTTTGCTTACAAGAGCAGGATATGCTGCTCCTGTCTACAAGACTAAACAGTTGAAGAACAACCAGTTTCGGGCCACAGTTGAGTTCAATGGAGTAGAGATAATGGGCCAACCTTGTAACAATAAGAAGAGTGCAGAGAAAGATGCCGCAGCTGAAGCGCTGCAATGGTTGATGGGCAAGCAAGCTGGCTGTGAGTATATCGATCACATGTCAATGTTTCTCAAAAAAAGTAAGAAGGATCACAATTAA 2706 0.4072 MLEFRSNLPAYKEKEAILSVISKNQVVIISGETGCGKTTQIPQFILESEIESVQGAACNIICTQPRRISAISVSERVAFERGEKLGESIGYKVRLEGMKGRDTHLLFCTTGILLRRLLADRNLKGVTHVIVDEIHERGMNEDFLLIVLKELLPHRPELKLILMSATLDAELFSSYFNGAPIVNILGFTHPVRTLFLENILEITGYRLTPSNQIDDYGQERAWKMNKQAPRKRKSQIASAVEDAIRSADFREYSLQTQESLSCWNPDCIGFSLIEYILCDICENKRPGAVLVFMTGWDDISSLKEKLQTHYVLGDLKRVLLLTCHGSMASSEQKLIFEEPGDGVRKVVLATNIAETSITVDDVVFVLDCGKAKETSYDALNNTPCLLPTWISKASAHQRRGRAGRVQPGECYHLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGSISDFLSRALQSPEILAVQNAVEYLKIIGALDENENLTTLGSYLTMLPMEPKLGKMLILGAIFNCLGPILTVVAGLSVRDPFLTPLDKKDLAEAAKSQYAGAYSDHLALVRAYAGWKEAEIDLVGYEYCWKNFLSFQSMKAIDALRREFIGLLTDIGLVDCNTTSCDTWSYDVNLIRAVICYGLYPGICSVVHNEKSFALKTMEDGQVLLYSNSVNARETRIPYPWLVFNEKIKVNSVFLRDSTAVSDSMMLLFGGSLSKGDADNHLKMLGGYLEFFMEPTVADMYQSIRRELDDFIQSKLLSPRMSIHSYHNLLSAVRFLISHDSCEGRFVFGRQVLKPSNISVMAPHQASLVPRTESGPGGDNSKSQLQTLLTRAGYAAPVYKTKQLKNNQFRATVEFNGVEIMGQPCNNKKSAEKDAAAEALQWLMGKQAGCEYIDHMSMFLKKSKKDHN 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04665 901 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 272 446 IPR001650 -
Mepo4g04665 901 SMART ultradead3 6 202 IPR014001 -
Mepo4g04665 901 FunFam DExH-box ATP-dependent RNA helicase DExH3 268 424 - -
Mepo4g04665 901 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 18 185 IPR014001 -
Mepo4g04665 901 Pfam DEAD/DEAH box helicase 16 168 IPR011545 GO:0003676|GO:0005524
Mepo4g04665 901 Pfam Oligonucleotide/oligosaccharide-binding (OB)-fold 624 705 IPR011709 -
Mepo4g04665 901 CDD SF2_C_RHA 255 414 - -
Mepo4g04665 901 SUPERFAMILY dsRNA-binding domain-like 808 876 - -
Mepo4g04665 901 SMART DRBM_3 814 877 IPR014720 -
Mepo4g04665 901 Gene3D - 448 552 - -
Mepo4g04665 901 Gene3D - 798 881 - -
Mepo4g04665 901 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 813 878 IPR014720 -
Mepo4g04665 901 Gene3D - 1 186 IPR027417 -
Mepo4g04665 901 FunFam Putative ATP-dependent RNA helicase DHX36 448 552 - -
Mepo4g04665 901 FunFam DExH-box ATP-dependent RNA helicase DExH3 792 881 - -
Mepo4g04665 901 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 566 IPR027417 -
Mepo4g04665 901 SMART helicmild6 300 406 IPR001650 -
Mepo4g04665 901 CDD DEXHc_RHA-like 24 184 - -
Mepo4g04665 901 FunFam DExH-box ATP-dependent RNA helicase DExH3 1 186 - -
Mepo4g04665 901 Pfam Double-stranded RNA binding motif 814 876 IPR014720 -
Mepo4g04665 901 SMART ha2_5 468 558 IPR007502 GO:0004386
Mepo4g04665 901 Pfam Helicase associated domain (HA2) 469 542 IPR007502 GO:0004386
Mepo4g04665 901 Pfam Helicase conserved C-terminal domain 276 405 IPR001650 -
Mepo4g04665 901 Gene3D - 271 425 IPR027417 -
Mepo4g04665 901 PANTHER ATP-DEPENDENT RNA HELICASE 1 727 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04665 Mepo-Chr4 56092767 56103065 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04665 4 56092767 56103065 Mepo4g04665 4 56092767 56103065 ECH