Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03108 ATGGAAGATCACAAAAACCAATCAGTTTCTGTTGAATCACCTCATGAAAGAAGAAAACTTCCAAATTTTCTTCTATCAGTGAGACTTAAATATGTGAAACTTGGTTACCATTACTTAATCTCAAAAGCTATGTACCTTTTACTCATACCACTTTTTGGAGCAGCTTCAGCTCATTTATCAACTATATCATACCATGATATTGTTCAACTATATGAAAATCTCAAATTCAATCTTGTATCAGTAACACTATGTACCAGTCTTATGGTATTTCTTGTGACACTTTACTTCATGAGTCGTCCAAGAGGTGTTTACTTGGTTGATTTTGCATGTTACAAACCAAAACAAGAATACACATGTACTAGAGAAATTTTCATGAATAGGTCTGAATTAACAGGTACATTTTCTGATGAAAATTTGGCTTTTCAAAAGAAGATACTTGAGAGGTCTGGTTTAGGTCAAAAGACTTATTTGCCCCCAGCAATATTGAGTGTTCCACCAAATCCTTGTATGGCTGAAGCAAGGAAAGAAGCTGAGGAAGTTATGTTTGGTGCTATTGATGAGCTTTTGGAGAAAACTGGTGTTAAGGCTAAGGATATTGGGATTTTGGTTGTGAATTGTAGTTTGTTTAATCCTACACCTTCTCTTTCTGCTATGATTGTGAATCATTATAAGTTAAGAGGGAATGTTCAAAGTTATAATCTTGGTGGTATGGGTTGTAGTGCTGGACTTATCTCTATTGACCTTGCTAAGCAGCTCCTACAGGTTCATCCAAACTCTTATGCCTTAGTGGTGAGCATGGAGAACATCACACTCAACTGGTATTTTGGCAATGACAGATCAATGTTGGTATCAAATTGTCTGTTTAGAATGGGAGGATCTGCAATTCTTCTCTCCAACAAAGCTTCTGACAGTAAAAGAGCTAAATACCAACTGATCCACACTGTCCGAACACATAAAGGCGCAGACGACAGATCATACGGTTGTGTCTTCCAAGAAGAAGATGAGAAGAAATCAATTGGTGTATCACTTTCAAAAGATTTAATGGCGGTCGCCGGAGAAGCACTCAAAACCAACATCACAACACTTGGTCCATTAGTCCTACCTATGTCAGAACAGCTTCTGTTTTTCGCAACTTTGGTTGCAAGAAAAGCTTTCAAGATGAAGATAAAACCCTACATTCCTGATTTTAAACTAGCTTTTGAGCATTTTTGTATTCATGCTGGTGGAAGAGCTGTTTTGGATGAGTTGGAGAAAAATCTTGATCTTAGTGATTGGCATATGGAGCCATCAAGAATGACACTGAATAGATTTGGTAACACTTCTAGTAGTTCTTTGTGGTATGAATTGGCTTATACTGAAGCTAAAGGGAGGATTAGAAAAGGTGATAGGACTTGGCAAATTGCATTTGGTTCTGGATTTAAATGTAATAGTGCTGTGTGGCGTGCATTGAGGACCGTTGATCCAGCTAAGGAGAAAAATCCATGGATGGATGAGATTCATGAGTTTCCTGTTCATGTGCCTAAAGTGGCAACCATTGGTTCATCAAGTTAG 1551 0.3765 MEDHKNQSVSVESPHERRKLPNFLLSVRLKYVKLGYHYLISKAMYLLLIPLFGAASAHLSTISYHDIVQLYENLKFNLVSVTLCTSLMVFLVTLYFMSRPRGVYLVDFACYKPKQEYTCTREIFMNRSELTGTFSDENLAFQKKILERSGLGQKTYLPPAILSVPPNPCMAEARKEAEEVMFGAIDELLEKTGVKAKDIGILVVNCSLFNPTPSLSAMIVNHYKLRGNVQSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGSAILLSNKASDSKRAKYQLIHTVRTHKGADDRSYGCVFQEEDEKKSIGVSLSKDLMAVAGEALKTNITTLGPLVLPMSEQLLFFATLVARKAFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLDLSDWHMEPSRMTLNRFGNTSSSSLWYELAYTEAKGRIRKGDRTWQIAFGSGFKCNSAVWRALRTVDPAKEKNPWMDEIHEFPVHVPKVATIGSSS 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03108 516 SUPERFAMILY Thiolase-like 312 482 IPR016039 GO:0016746
Mepo4g03108 516 PIRSF Very_long_ch_3-ktacl-CoA_syn 22 516 IPR012392 GO:0006633|GO:0016020|GO:0016747
Mepo4g03108 516 Gene3D - 106 482 IPR016039 GO:0016746
Mepo4g03108 516 FunFam 3-ketoacyl-CoA synthase 113 482 - -
Mepo4g03108 516 CDD CHS_like 85 480 - -
Mepo4g03108 516 PANTHER 3-KETOACYL-COA SYNTHASE 74 505 IPR012392 GO:0006633|GO:0016020|GO:0016747
Mepo4g03108 516 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 401 481 IPR013747 -
Mepo4g03108 516 SUPERFAMILY Thiolase-like 89 304 IPR016039 GO:0016746
Mepo4g03108 516 Pfam FAE1/Type III polyketide synthase-like protein 95 383 IPR013601 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03108 Mepo-Chr4 40416913 40419590 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03108 3 516 Miscellaneous Gene Families AT1G04220 75.862 0.0 828
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g03108 4 40416913 40419590 Mepo4g03108 4 40416913 40419590 ECH