Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01948 ATGAGTACCATTGCTCTGCGCCAGTTCATCCGGGCGTTCACAAGGTTAGGAGATATAAAATCTGCGTATAGAACACTACAACAGATGGTTTCATTAGCCATGAAGGGAAATGTTTCTATTCGTAGAACAGTTTATGGGACGTTGTGTTCTACTAGATTGGACATCCCTGTTCCTTCAAATAATGAGCTAGACTCGGCCATATTGGACCCGAGGAAGAGCAAACAACACGACTCTTGTTTACTCTCTCCTCCTTTGTATTTACCAGACACTATTTCTGCAAATAAGGCGCAACAACTTATTTGTATGAATAATAAAAAAGTTAAGAGTGCTGAAGTAAATGGGATTAATGAACAAAAGAGCTCAGTGCTTGTGAAGGTTCTTAGGTGGTCTTTTAATGATATAATACATGGGTGTGCAAAAGAAAAGAATTATATTCTTGCATGGAAGCTTATATTGCAGATGCAAAATCTTGGTTTGCAGCCAACCAGCTTTACATATGATGGCCTTATTAGAGCAGTTGTATCTCAGAGAAATTTTGGTGATGCCATGAAAATGTTAAGAAAAATGCAGCAGGAGAATTTGAAGATACACGATTCAACTCTAGCTACACTTTCAGTTACTTTCAGCAGAGAACTACAATTAGATTTAGCCGAGTCTTTGCTGAATCAGATTTCTGAATGCTTGCATCCACATCCTTATAATGCTTTGCTGGTTTCATGTGATGCAATGAATCAACCTGAGCGTGCTTTGCGAGTGTTTGCGAAGATGAGGAAAATAAAACTTTTACCTGATATGAGAACATACGAGCTCCTGTTTTCATTATTTGGTATTGCTAATGCCCCATATGAAGACAGTAATATGCTGTCACAGGTGGATACTGCTAAAAGAATAAATGCTATAGAAAGGGATATGGCAAATAATGGCTTTCAGCACAGTCACCTGTCAAGGAAAATGAGTCTTGCCAAAGAGTTGAAATCCCTTGGAGAAGAAGGGATGATAAGAGAGATGATCCAATATTTACATGTGGCGGAGAATCTTTTCATATATAGCAACCCTTCATTGGGAACAGATATGTACAACATAGTGTTGCATTATCTTGTTGAAGCCCAAGAAAGCGACATGGCAATTGAAGTTTTCAAGAAGATGAAGTTGTGTGGCTGCCACCCTGATTCCACTACATACAATACAATGATTGACTGTTGTAGTGTCATAAGAAGTTATAGATCTGCTTCTTTGTTGATTGCAATGATGATACGGGAAGGGTTTTGTCCGGTTGTTTGTACATATACTGCTCTCATTAAGAATTTGTTGGAAGATGAGAATTTTAATGAAGCACTGAATGTTTTGGAGAGAATCAAATTGGATGGCATCCAACTTGATGTACTGCTGTTTAACACGTTTCTTCGACAAGCATGTTACAAGGGAAGAATCGATGTAATTGAGTTTATTGTGGAGTTTATGCACCAAGAAAAAGTTCAGCCTGATCCAACAACATGTGGCTACGTCTTCTCTGCATATGTAAATTCCAGTTTTCACAATACAGCAATAGAAGCATTGCAGGTTTTAAGTTTGTGTATGATGTCTGTAGATGGCAACATACTTCAAGAGTGGAAAAAATTTGTGGATGAATTCATCCTTGACGAAGATTTGGCTTCTGAGTCTCACATATTTAAATTATTTGAAGATTCTGAAGATAAAGTTGCAACAGGGTTGTTGAATTTAAGATGGTGTGCCATGATTGGGTTTCCAATATGTGAGTCAGCTGACCAGAGCCTATGGACTAAAAGACTTGAGTCGCGATTCCAAAAGAGGCTAGCGTCTGGTTCCATAATAGGAGAGGAATTGTGA 1848 0.3831 MSTIALRQFIRAFTRLGDIKSAYRTLQQMVSLAMKGNVSIRRTVYGTLCSTRLDIPVPSNNELDSAILDPRKSKQHDSCLLSPPLYLPDTISANKAQQLICMNNKKVKSAEVNGINEQKSSVLVKVLRWSFNDIIHGCAKEKNYILAWKLILQMQNLGLQPTSFTYDGLIRAVVSQRNFGDAMKMLRKMQQENLKIHDSTLATLSVTFSRELQLDLAESLLNQISECLHPHPYNALLVSCDAMNQPERALRVFAKMRKIKLLPDMRTYELLFSLFGIANAPYEDSNMLSQVDTAKRINAIERDMANNGFQHSHLSRKMSLAKELKSLGEEGMIREMIQYLHVAENLFIYSNPSLGTDMYNIVLHYLVEAQESDMAIEVFKKMKLCGCHPDSTTYNTMIDCCSVIRSYRSASLLIAMMIREGFCPVVCTYTALIKNLLEDENFNEALNVLERIKLDGIQLDVLLFNTFLRQACYKGRIDVIEFIVEFMHQEKVQPDPTTCGYVFSAYVNSSFHNTAIEALQVLSLCMMSVDGNILQEWKKFVDEFILDEDLASESHIFKLFEDSEDKVATGLLNLRWCAMIGFPICESADQSLWTKRLESRFQKRLASGSIIGEEL 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01948 615 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 390 424 IPR002885 -
Mepo4g01948 615 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 2 599 - -
Mepo4g01948 615 Pfam Pentatricopeptide repeat domain 233 276 IPR002885 -
Mepo4g01948 615 Pfam Pentatricopeptide repeat domain 448 508 IPR002885 -
Mepo4g01948 615 Pfam PPR repeat family 130 173 IPR002885 -
Mepo4g01948 615 Pfam PPR repeat family 358 401 IPR002885 -
Mepo4g01948 615 Gene3D Tetratricopeptide repeat domain 284 439 IPR011990 GO:0005515
Mepo4g01948 615 Gene3D Tetratricopeptide repeat domain 118 208 IPR011990 GO:0005515
Mepo4g01948 615 Gene3D Tetratricopeptide repeat domain 440 531 IPR011990 GO:0005515
Mepo4g01948 615 Gene3D Tetratricopeptide repeat domain 209 283 IPR011990 GO:0005515
Mepo4g01948 615 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 355 389 IPR002885 -
Mepo4g01948 615 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 229 263 IPR002885 -
Mepo4g01948 615 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 127 161 IPR002885 -
Mepo4g01948 615 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 162 196 IPR002885 -
Mepo4g01948 615 NCBIfam pentatricopeptide repeat 358 391 IPR002885 -
Mepo4g01948 615 NCBIfam pentatricopeptide repeat 393 424 IPR002885 -
Mepo4g01948 615 NCBIfam pentatricopeptide repeat 164 195 IPR002885 -
Mepo4g01948 615 NCBIfam pentatricopeptide repeat 427 461 IPR002885 -
Mepo4g01948 615 NCBIfam pentatricopeptide repeat 130 162 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01948 Mepo-Chr4 24696553 24701164 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g01948 4 24696553 24701164 Mepo4g01948 4 24696553 24701164 ECH