Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01927 ATGACTCAAGACGAAGAGATGAAAGATCGCCCAACACCTTCTCAATCTATTCCTATTCCTATTCCTTCCACATTGCAACATTTGAAGGAAATAGCATCGATCATTGAAACCGGTTCCAACCTGAAAGAAGTTCGCAAAATTTCTCGTGCAGTGCGCCTTACTATGGCGTTTAGGTCCAAACTCACTGCTCCTCTTCTCTCATCTTTCCTTCATCATGTTCTTCCTCCTCATTCTACCTTATCTTCTTATCTTCCCAATTCAAAGGATGGTGATCATGAGATGGAAGTGGACACTGCAACATCTGCATCTATTCAAACTCCAGCCAAGCACTTGTTGCCGGAGCTAGAAATCTACTGTTACTTCCTCCTGCTTCTTTTTCTGATTGATCAGAAACGATACAATGAGGCCAAAGCTTGTTCCTCAGCTAGCATTGATCGGCTCAAGAACTTGAATAGAAGAACTGTTGATGTTATTGCTTCGAGACTGTACTTTTATTACTCATATAGCTATGAGCTTACTGGAGATCTTGCTGAAATTCGAGGCACCCTCTTTCAGTTGCACCGGATTGCTACCTTGCGCCATGATGAGCTTGGTCAGGAAACACTTCTTAATTTGTTACTTCGTAACTACCTCCACTACAACCTATATGATCAGGCAGAGAAGTTGAGGTCGAAGGCTCCACGATTTGAGGCACATTCAAACCAGCAGTTCTGTCGCTATCTCTTCTACCTCGGGAAAATTCGGACCATTCAGTTGGAGTATACCGATGCAAAAGAGTCTCTCCTGCAGGCGGCTCGTAAAGCACCAGTTGCAGCACAGGGTTTTCGAATTCAGTGTAACAAGTGGGCCATTATAGTTCGTTTACTGTTGGGAGAAATTCCCGAGAGGACCATCTTTGTCCAGAAAGGAATGGAGAAAGCTTTGAGGCCTTACTTTGAACTTACTAATGCTGTTAGGATTGGTGATTTAGAGCTCTTTAGAAATGTTGCAGAGAAGTATGCTACTACTTTCAATACAGACGGAACCAATAATTTGATCGTTCGATTGCGCCATAATGTCATCAGGACTGGTTTGCGTAACATCAGTATATCATATTCTCGCATCTCATTGGCCGATGTAGCTCAGAAGTTGAGGTTGAGCTCTGCAGATCCCATTGCTGATGCTGAAAGCATTATATCAAAGGCTATCCGTGATGGGGCAATTGATGCGACATTGGATCATGCTAATGGATGGATGGTGTCCAAGGAAATTGGAGATATTTACTCTACAAACGAGCCTCAGTTGGCTTTCAATTCTCGGATTGCCTTTTGTCTTAACATGCACAATGAGGCTGTTCAAGCACTGCGTTTTCCAAAAAACACACACAAGGAGAAAGAAATTGCTGAGAAGCGGAGAGAGAGGCAACAACAAGAGCAAGAACTGGCAAAGCATATTGAGGAGGAAGATGATGATGATGACTTCTGA 1464 0.4317 MTQDEEMKDRPTPSQSIPIPIPSTLQHLKEIASIIETGSNLKEVRKISRAVRLTMAFRSKLTAPLLSSFLHHVLPPHSTLSSYLPNSKDGDHEMEVDTATSASIQTPAKHLLPELEIYCYFLLLLFLIDQKRYNEAKACSSASIDRLKNLNRRTVDVIASRLYFYYSYSYELTGDLAEIRGTLFQLHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVAAQGFRIQCNKWAIIVRLLLGEIPERTIFVQKGMEKALRPYFELTNAVRIGDLELFRNVAEKYATTFNTDGTNNLIVRLRHNVIRTGLRNISISYSRISLADVAQKLRLSSADPIADAESIISKAIRDGAIDATLDHANGWMVSKEIGDIYSTNEPQLAFNSRIAFCLNMHNEAVQALRFPKNTHKEKEIAEKRRERQQQEQELAKHIEEEDDDDDF 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01927 487 MobiDBLite consensus disorder prediction 1 20 - -
Mepo4g01927 487 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 344 437 IPR000717 -
Mepo4g01927 487 SMART PCI/PINT associated module 173 344 - -
Mepo4g01927 487 MobiDBLite consensus disorder prediction 453 487 - -
Mepo4g01927 487 Gene3D - 241 448 - -
Mepo4g01927 487 Pfam PCI domain 310 415 IPR000717 -
Mepo4g01927 487 Pfam Proteasome regulatory subunit C-terminal 419 485 IPR013586 GO:0000502|GO:0030234|GO:0042176
Mepo4g01927 487 SUPERFAMILY "Winged helix" DNA-binding domain 347 417 IPR036390 -
Mepo4g01927 487 FunFam 26S proteasome non-ATPase regulatory subunit 3 119 442 - -
Mepo4g01927 487 Coils Coil 453 481 - -
Mepo4g01927 487 MobiDBLite consensus disorder prediction 453 476 - -
Mepo4g01927 487 ProSiteProfiles PCI domain profile. 238 419 IPR000717 -
Mepo4g01927 487 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3 36 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01927 Mepo-Chr4 24536949 24542837 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g01927 4 24536949 24542837 Mepo4g01927 4 24536949 24542837 ECH
Mepo4g01927 4 24536949 24542837 Mepo3g07829 3 91391536 91396621 PCT