Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01860 ATGGCTTCCTTAGAAGAAAAGGCTAAAAGTGTTGGAGGAGTTGTTGGTGGTCAAACTCTTGTTGCTGAAATGAAGTTGCTCAAAGAAATGCAAGAACATTGTGGGGTTAGAAAGACTTTAAATTCAGAATTATGGCATGCTTGTGCTGGCCCTCTTGTGTCTTTGCCTCAAGTGGGGGGTCTTGTCTATTACTTCCCTCAAGGACATAGTGAACAGGTTGCAGCTTCTACTAGAAGAATAGCTACCTCACAGATTCCAAACTACCCTAGCCTTCCATCTCAGTTGTTGTGTCAAGTACAAAATGTCACACTACATGCTGACAAGGAGACAGATGAAATCTATGCTCAAATGACTCTCCAACCACTGAATTCTGAAAAAGAAGTGTTTCCGGTATCTGAGTTTGGATTAAACAAAAGTAAACATCCAACTGAGTTTTTCTGCAAAACTTTAACTGCAAGTGATACTAGCACACATGGTGGCTTTTCGGTTCCACGCAGAGCTGCGGAAAAGCTATTTCCTCCATTGGATTACACAATTCAACCCCCAACTCAAGAACTTGTTGTTCGAGATTTGCATGATAATACATGGACATTTCGACATATTTACCGAGGTCAGCCGAAGAGACACCTTCTCACAACAGGTTGGAGTTTGTTTGTCGGCTCAAAAAGGCTTAGAGCAGGCGATTCTGTTCTTTTTATCAGGGATGAGAAGTCGCAATTGCGAGTGGGTGTAAGGCGTGCTAATCGTCAACAGACAACACTGCCATCATCCGTACTTTCTGCTGATAGCATGCACATTGGTGTGCTTGCTGCTGCAGCTCATGCTGCTGCTAATCGAAGTCCATTCACGATTTTCTACAATCCAAGGGCATGTCCTTCAGATTTTGTTATTCCACTGGCCAAATACAGAAAATCTGTTTATGGGACTCAGCTGTCAGCTGGCATGAGATTTGGTATGATGTTTGAGACCGAGGAATCGGGTAAGCGCAGATATATGGGTACAATTGTAGGTATCAGTGATGTCGATCCTTTAAGGTGGCCTGGTTCTAAGTGGCGAAATATTCAGGCTGAATGGGATGAGCCAGGGTGCGGAGATAAGCAAAATAGGGTTAGTGTTTGGGAGATTGAGACTCCAGAAAGTCTTTTCATCTTTCCTTCTTTGACTTCAAGCCTAAAACGGCCATTGCAATCCGGATATTTGGAAAATGAGTGGGGAACTTTGATACGAAGACCCTTTATTAAAGTACCTGAAAATGGAGGAACAATGGAGATCTCAAACTCAATGCCAAATCTTTACCAAGAAAACATGATGAAGATGTTTTATAAACCACAGGTGATCAACAACAATGGAGCCTTTTTACCTATCATGCAACAAGATTATGCTCCTACAAGAGTTCCCTTGCAAGATATGAAGTTCACACAGGCAATAGAGAATCCGAAAGTTCACCTTTCAAGCACAGAAAGCATACCTAATAATACCTTAAACATGCATTCATTGTTGAAAAGTGACCAACTGGAAAAGTTGCAGCCTTTGGCCAAAACCGATAATTCGAAATTAGAATCAGAGGTGTTACCTGATCATATGTTTGACTTCCCTTCTTTTGAAAGCTGCAACAACATTGAAAAGGTGAATACGGCGAACCAATTAACATATCATAATCAAAACCAAAACCAAAGTCAAAATCCATTACCCGCTCATACTAGTCCATGGACTATGCAGCAGCCTCAGTTAGAATCATCAATATCACATCCTCAACTGATTGACATGGTCCAACCCGATTCTTCTATTGTAAACGGCATGCTTCCTCAGCTAGACGTTGACGAATGGATGATGTATTCTTCTTGTCAGCCTCAAGTAGTGAATCCCTCTATACCCTCAATGAACCAAGAAGTGTGGGATCAATATGTCAAGAATTTTAACTTGAGGGATCTTTCAGCTGAAAGCAATAACCAAAGTGAAATTTGTGTCAATGTTGATGCTAGTAATAGTGTGAGTACCACTATGGTTGATCCTTCTACTTCAAACACCATTTTTGACGACTTTTGCTCAATGAAGGATAAAGATTTTCAGCACCCTCAAGATTGCATGGTTGGCAACTTAAGTTCTAGTCAGGATGGCCAGTCTCAGATTACCTCTGCTAGTCTAGCTGAGTCGCACGCCTTTTCTCTGCGAGACAACTCTGGTGGTACTTCTTCAAGCCATGTTGATTTTGATGAAAGTAGTTTTCTGCAGAATAATAACTCTTGGAAGCAAGTAGCTGCACCAATCCGAACCTACACAAAGGTCCAGAAAGCAGGTTCTGTAGGAAGATCAATTGATGTGACTACTTTCAAAAACTATGAAGAGTTGATCCGCTCAATTGAATGCATGTTTGGACTGGACGGTCTGCTGAATGACACAAAAGGTTCCGGATGGAAATTAGTATATGTGGATTACGAGAGTGATGTTCTGCTTGTTGGAGATGATCCTTGGGAGGAATTTGTGGGGTGTGTCCGCTGTATACGAATATTATCACCTTCAGAAGTTAAAGAGATGAGTGAAGAAGGGATGAAGCTTCTAAACAGTGGAGCATTGCAAGGAATCAATGTGTGA 2592 0.4155 MASLEEKAKSVGGVVGGQTLVAEMKLLKEMQEHCGVRKTLNSELWHACAGPLVSLPQVGGLVYYFPQGHSEQVAASTRRIATSQIPNYPSLPSQLLCQVQNVTLHADKETDEIYAQMTLQPLNSEKEVFPVSEFGLNKSKHPTEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLRVGVRRANRQQTTLPSSVLSADSMHIGVLAAAAHAAANRSPFTIFYNPRACPSDFVIPLAKYRKSVYGTQLSAGMRFGMMFETEESGKRRYMGTIVGISDVDPLRWPGSKWRNIQAEWDEPGCGDKQNRVSVWEIETPESLFIFPSLTSSLKRPLQSGYLENEWGTLIRRPFIKVPENGGTMEISNSMPNLYQENMMKMFYKPQVINNNGAFLPIMQQDYAPTRVPLQDMKFTQAIENPKVHLSSTESIPNNTLNMHSLLKSDQLEKLQPLAKTDNSKLESEVLPDHMFDFPSFESCNNIEKVNTANQLTYHNQNQNQSQNPLPAHTSPWTMQQPQLESSISHPQLIDMVQPDSSIVNGMLPQLDVDEWMMYSSCQPQVVNPSIPSMNQEVWDQYVKNFNLRDLSAESNNQSEICVNVDASNSVSTTMVDPSTSNTIFDDFCSMKDKDFQHPQDCMVGNLSSSQDGQSQITSASLAESHAFSLRDNSGGTSSSHVDFDESSFLQNNNSWKQVAAPIRTYTKVQKAGSVGRSIDVTTFKNYEELIRSIECMFGLDGLLNDTKGSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVKEMSEEGMKLLNSGALQGINV 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01860 863 ProSiteProfiles PB1 domain profile. 757 841 IPR000270 GO:0005515
Mepo4g01860 863 SUPERFAMILY CAD & PB1 domains 758 836 - -
Mepo4g01860 863 CDD B3_DNA 145 246 IPR003340 GO:0003677
Mepo4g01860 863 FunFam Auxin response factor 310 382 - -
Mepo4g01860 863 Pfam B3 DNA binding domain 146 247 IPR003340 GO:0003677
Mepo4g01860 863 Gene3D - 143 247 IPR015300 -
Mepo4g01860 863 FunFam Auxin response factor 752 846 - -
Mepo4g01860 863 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 37 847 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mepo4g01860 863 Gene3D - 310 382 - -
Mepo4g01860 863 ProSiteProfiles B3 DNA-binding domain profile. 146 248 IPR003340 GO:0003677
Mepo4g01860 863 SMART B3_2 146 248 IPR003340 GO:0003677
Mepo4g01860 863 FunFam Auxin response factor 144 248 - -
Mepo4g01860 863 Gene3D - 753 846 - -
Mepo4g01860 863 Pfam AUX/IAA family 747 844 IPR033389 -
Mepo4g01860 863 SUPERFAMILY DNA-binding pseudobarrel domain 136 275 IPR015300 -
Mepo4g01860 863 Pfam Auxin response factor 272 355 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01860 Mepo-Chr4 23840653 23845713 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mepo4g01860 AUX_IAA 9e-11 CL0072