Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01832 ATGAAGATCCAGTGTGATGTATGCAACAAAAATGAGGCTTCATTATTCTGCACCGCCGACGAAGCCGCCTTATGTATCGACTGCGACCACCGTGTCCACCACGCCAACAAACTCGCTTCCAAACACCACCGTCTCGCTCTTCATAACCCAACTCCTAAACACCACCCTCTCTGCGATATTTGTCAGGAGAGAAGAGCTTTTGTGTTATGTAAACAAGACAGAGCAATTCTATGCAAAGATTGTGATTCATCTATTCATTCAGTGAATGAACTTACACAGAAACATGATAGGTTTCTTCTGACTGGTGTTAAGATTTCAACTACAAACTCATCTTCTTCATCTTCATCATCAACACCTTCAGCTACTACCAAGTCAAATCATGTTCCTTCTTCTTTGATTGAAAAATCTACTACTCCTTCACCAACATCTATGGAAGAAGGAAGTGGTGGTTCTACTATATCTCAGTACTTGATTGAGACTCTACCTGGTTGGCAAGTTGATGACTTTCTTGATTCTTCTTCTGTTCCCTTTGCTTTCTCCAAGGGTGATGAATTGTTTAATGCTGGTATTGAAGAAAATCTTGATTCATTCTTTCCCAATAATAATATGGGGATCTGGGTTCCTCAAGCACCACCACCTTCTCTATATTCATCTTCACAAATAATGATGGAGCAGATTGAGACAACAAAGAAGGGGTACAACAACAAAAGCAGCATCAACAAATCAAGGTTGAGGGATGATCATGATAGTAATATTTTCACAGTTCCTCAGATTAGTCCTGTTGCCAATTCCAAGAGAACAAGATATCTATGGTAG 816 0.4007 MKIQCDVCNKNEASLFCTADEAALCIDCDHRVHHANKLASKHHRLALHNPTPKHHPLCDICQERRAFVLCKQDRAILCKDCDSSIHSVNELTQKHDRFLLTGVKISTTNSSSSSSSSTPSATTKSNHVPSSLIEKSTTPSPTSMEEGSGGSTISQYLIETLPGWQVDDFLDSSSVPFAFSKGDELFNAGIEENLDSFFPNNNMGIWVPQAPPPSLYSSSQIMMEQIETTKKGYNNKSSINKSRLRDDHDSNIFTVPQISPVANSKRTRYLW 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01832 271 SMART bboxneu5 4 47 IPR000315 GO:0008270
Mepo4g01832 271 SMART bboxneu5 53 100 IPR000315 GO:0008270
Mepo4g01832 271 CDD Bbox1_BBX-like 5 47 - -
Mepo4g01832 271 CDD Bbox1_BBX-like 57 100 - -
Mepo4g01832 271 Gene3D Classic Zinc Finger 1 100 - -
Mepo4g01832 271 FunFam B-box zinc finger protein 21 1 98 - -
Mepo4g01832 271 Pfam B-box zinc finger 4 43 IPR000315 GO:0008270
Mepo4g01832 271 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270
Mepo4g01832 271 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 261 - -
Mepo4g01832 271 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Mepo4g01832 271 MobiDBLite consensus disorder prediction 107 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01832 Mepo-Chr4 23547191 23548775 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Mepo4g01832 zf-B_box 2.2e-05 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g01832 4 23547191 23548775 Mepo3g08001 3 92863456 92865469 PCT