Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01829 ATGGCCCACCGTTTCCTCATCGCTCTCTTCCTCTTCTCCGCCGTTGCAACCGCTGCAACAACCCTCTCCGACGACACAAACTCCGACGATCTTCTCATCCGACAAGTCGTCGACACCGCAGAAGATCACGTACTAAACGCAGAGCATCACTTCACATCTTTCAAGTCAAAGTTCAGCAAAAACTATGCAACGAAAGAAGAACACGATTACCGATTCGGCGTGTTCAAATCAAATCTCATCAAAGCGAAGCTTCACCAAAAGCTTGATCCTTCTGCGCAACACGGAATCACTAAATTCTCTGATTTAACGGCGTCTGAGTTCCGTCGTCAGTTTCTTGGACTTAACAAACGTCTCCGTTTGCCGGCTCACGCTCAGAAGGCTCCGATTCTTCCTACTAACAATCTTCCAGAGGATTTCGATTGGCGCGAGAAAGGCGCTGTCACTCCCGTCAAGGATCAGGGTTCTTGCGGTTCGTGTTGGGCGTTTAGTACTACTGGAGCTTTGGAAGGAGCAAACTATCTGGCGACTGGGAAGCTAACGAGTCTTAGTGAGCAACAGCTTGTGGATTGCGATCATGTGTGTGATCCAGAGGAACGTAATTCTTGTGACTCTGGCTGTAACGGTGGATTGATGAACAACGCGTTCGAATACATACTCCAGTCTGGGGGTGTAGTGTCTGAAAAGGACTATGCTTACACAGGAAGAGATGGATCCTGCAAGTTCGACAAAAGCAAGATTGTAGCTTCTGTATCTAACTTCAGTGTTGTTTCTCTTGACGAAGACCAAATTGCTGCAAATCTAGTGAAGAATGGCCCTCTTGCAGTTGCTATTAATGCAGCATGGATGCAGACATATATGAGTGGTGTCTCATGCCCATACATTTGTGCCAAAGCACGTTTGGATCATGGGGTTCTTCTAGTTGGTTTTGGCCAAGGTGGCTATGCTCCCATTCGATTGAAGGAAAAGCCTTACTGGATCATAAAGAATTCATGGGGCCAGAATTGGGGTGAGGAAGGATATTACAAGATCTGCAGAGGCCGAAATGTATGTGGAGTGGATTCCATGGTCTCAACTGTAGCTGCAGCTCAATCTTGA 1095 0.4712 MAHRFLIALFLFSAVATAATTLSDDTNSDDLLIRQVVDTAEDHVLNAEHHFTSFKSKFSKNYATKEEHDYRFGVFKSNLIKAKLHQKLDPSAQHGITKFSDLTASEFRRQFLGLNKRLRLPAHAQKAPILPTNNLPEDFDWREKGAVTPVKDQGSCGSCWAFSTTGALEGANYLATGKLTSLSEQQLVDCDHVCDPEERNSCDSGCNGGLMNNAFEYILQSGGVVSEKDYAYTGRDGSCKFDKSKIVASVSNFSVVSLDEDQIAANLVKNGPLAVAINAAWMQTYMSGVSCPYICAKARLDHGVLLVGFGQGGYAPIRLKEKPYWIIKNSWGQNWGEEGYYKICRGRNVCGVDSMVSTVAAAQS 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01829 364 CDD Peptidase_C1A 136 359 IPR039417 -
Mepo4g01829 364 Pfam Papain family cysteine protease 135 358 IPR000668 GO:0006508|GO:0008234
Mepo4g01829 364 Pfam Cathepsin propeptide inhibitor domain (I29) 51 107 IPR013201 -
Mepo4g01829 364 FunFam Cysteine protease RD19A 31 360 - -
Mepo4g01829 364 SMART pept_c1 135 360 IPR000668 GO:0006508|GO:0008234
Mepo4g01829 364 Gene3D Cysteine proteinases 21 360 - -
Mepo4g01829 364 SMART Inhibitor_I29_2 51 107 IPR013201 -
Mepo4g01829 364 PRINTS Papain cysteine protease (C1) family signature 302 312 IPR000668 GO:0006508|GO:0008234
Mepo4g01829 364 PRINTS Papain cysteine protease (C1) family signature 153 168 IPR000668 GO:0006508|GO:0008234
Mepo4g01829 364 PRINTS Papain cysteine protease (C1) family signature 324 330 IPR000668 GO:0006508|GO:0008234
Mepo4g01829 364 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 300 310 IPR025660 -
Mepo4g01829 364 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 324 343 IPR025661 -
Mepo4g01829 364 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 47 352 IPR013128 GO:0008234
Mepo4g01829 364 SUPERFAMILY Cysteine proteinases 47 358 IPR038765 -
Mepo4g01829 364 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 153 164 IPR000169 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01829 Mepo-Chr4 23489854 23492416 Dispersed/Wgd