Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01821 ATGTATCCGAACCAAGCATTTTCTTCGGGATCTTACGCGGAGATGATATCCGGGAATACTTTGTTACCTCATAATTACAGTGAATCTGTAGGAGGACAAAATGAGTTGAAGTTTATGACATCTATGGATGACACGATGAATATGCTGTCGATTGATCAGGGGCATTCCAATGCTAGTACGAGCGATCCAAGGACACAATTCGGACTCGTTGAGGGCGAGCAAAACGTGCAATGCCAGGGCCTGTCTCTTAGCCTTGGGACAATGATGCCTTCCTTTCAATATCAGTATCCTGGCAACAGTTTCACCTCGCTAATGAATGCGCAAATTTCAAACTTGAAGGGATCTGCATCTCTTAAGGATGATGATGCTGAGTGCATGGCATCTTTGTCTTCTGGAGGTTTTCAAAACAATGTCAAAAGGGAGGGTTTGTATAATCCACATCCTTCAATATCCCTTAATGAAGGCCAATCTGATCCGTGCCTGCAAGGATCAGCAGTTATTCCGAACAATGCTCTTAACTCTCATTACCTTAAGGCAGCACAGGAACTTCTTGATGAAATAGTTAATGTCCGAAAGGGCTTGAAACAAAACGGATTGGAAAAACAACAGAGTTTTCGTGATGCTGGTTTAGATGCTTCCAAAGATTTTGATGGAAAATCTACAAGTCAATCTATGCAAGTATCTTCAGGCCCTAATGGTTCTAATGCAAACAACTCTTCATGTGAGCTATCGCCTGCGGAACGACAGCATTTATTGGACAAGAAAACAAAACTTTTGTCCATGTTGGATGAGTTAGACAAAAGATACCGACAATACTGTCATCAAATGCAGATTGTTGTGTCATCTTTTGACATGGTTGCTGGTTGTGGCGCAGCCGAACCATACACTGCTCTTGCTTTGCGCACCATTTCTCGTCACTTTCGCTGTTTGCGTGATGCTATTAGCAGCCAAATTCAATTGACTCAAAGGAACCTTGGAGAACAAGAGGGAATACCTCGTCTCCGCTATGTCGATCAGCAGCTTAGACAACAAAAAGCTCTTCAGCAGCTTGGTGTAATGAGACAAGCTTGGAGACCTCAGAGAGGACTTCCTGAGAGCTCTGTGTCAATACTCCGTGCGTGGCTCTTCGAGCATTTCCTTCATCCTTATCCAAAGGATTCCGAGAAAATCATGTTGGCAAGACAAACAGGCTTGACCAGAAACCAGGTGGCGAATTGGTTCATTAATGCGAGGGTGCGTCTTTGGAAACCAATGGTCGAAGAAATGTACAAGGAAGAGTTTGGTGATTCGGAGACAAGCAGCAATCTTTTATCAGAAAACACACCGAAAGCTCCGAGAGACGATGATGTTCGAGTGTGGGATGATAAAAGGGAAGAGTCTCATAGCAAGTTAATGAATGTTGATGGTGTTCAACAACAAGGTCAAATTGCAGGGTTGAAGTTAGATCATGCATCCTCCTCAACCACAGAATTGGATAGAGGGATTCAAAGTAGTGATCATTGGACAAATGTGATGGATTCTAGAATTGGGAAAATGCAAGGTGACCAACAAAGGTTTAACATGAACAATAGTCCTTATTCAAATCCACCTATCCCAACCAACCAAAATAGTGATGGCTGCATAATGGATTCTACTCCTACAACTTATGATGATTTATCAGAGTTGAATAACTTTGGTGTTGGTGGCCATGTTTCACTTGCATTAGAGTTGAGGAACTCTGAAAGTGATGGATTTGGTTTGTCCAATGATGACATCAATAAAAGGCGTAATCAAACAATGGCTTCTTCACCAGATACTGATTTGTTAGACTATCACTTCACAGACTCTGGAAAGCAACAACACAAGTTTGGCAATCCACATTTGTTGCATGAGTTTGTTGTCTGA 1884 0.4225 MYPNQAFSSGSYAEMISGNTLLPHNYSESVGGQNELKFMTSMDDTMNMLSIDQGHSNASTSDPRTQFGLVEGEQNVQCQGLSLSLGTMMPSFQYQYPGNSFTSLMNAQISNLKGSASLKDDDAECMASLSSGGFQNNVKREGLYNPHPSISLNEGQSDPCLQGSAVIPNNALNSHYLKAAQELLDEIVNVRKGLKQNGLEKQQSFRDAGLDASKDFDGKSTSQSMQVSSGPNGSNANNSSCELSPAERQHLLDKKTKLLSMLDELDKRYRQYCHQMQIVVSSFDMVAGCGAAEPYTALALRTISRHFRCLRDAISSQIQLTQRNLGEQEGIPRLRYVDQQLRQQKALQQLGVMRQAWRPQRGLPESSVSILRAWLFEHFLHPYPKDSEKIMLARQTGLTRNQVANWFINARVRLWKPMVEEMYKEEFGDSETSSNLLSENTPKAPRDDDVRVWDDKREESHSKLMNVDGVQQQGQIAGLKLDHASSSTTELDRGIQSSDHWTNVMDSRIGKMQGDQQRFNMNNSPYSNPPIPTNQNSDGCIMDSTPTTYDDLSELNNFGVGGHVSLALELRNSESDGFGLSNDDINKRRNQTMASSPDTDLLDYHFTDSGKQQHKFGNPHLLHEFVV 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01821 627 SUPERFAMILY Homeodomain-like 358 424 IPR009057 -
Mepo4g01821 627 ProSiteProfiles 'Homeobox' domain profile. 354 417 IPR001356 GO:0003677
Mepo4g01821 627 SMART HOX_1 357 421 IPR001356 GO:0003677
Mepo4g01821 627 Pfam Homeobox KN domain 374 413 IPR008422 GO:0003677|GO:0006355
Mepo4g01821 627 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 112 438 - -
Mepo4g01821 627 SMART prehox3 164 316 IPR006563 -
Mepo4g01821 627 MobiDBLite consensus disorder prediction 426 448 - -
Mepo4g01821 627 CDD homeodomain 357 418 IPR001356 GO:0003677
Mepo4g01821 627 Pfam Associated with HOX 172 315 IPR006563 -
Mepo4g01821 627 Gene3D - 354 432 - -
Mepo4g01821 627 Coils Coil 177 197 - -
Mepo4g01821 627 MobiDBLite consensus disorder prediction 216 243 - -
Mepo4g01821 627 MobiDBLite consensus disorder prediction 210 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01821 Mepo-Chr4 23403592 23408024 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Mepo4g01821 POX 1.9e-49 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g01821 4 23403592 23408024 Mepo4g01821 4 23403592 23408024 ECH
Mepo4g01821 4 23403592 23408024 Mepo3g07905 3 92070435 92072893 PCT
Mepo3g07904 3 92062241 92066086 Mepo4g01821 4 23403592 23408024 PCT