Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01815 ATGATGAGATGCGCATGCGTTAACGGTGGTTCCGTTATTCTTCAATCATCTTCTTCTTCTTCTTCTTCTTCATCAATTCAATTTCAATTTCAATTTCAACAACAACGCTATTATCATCATAATCATCAACGTTATCTAAATCTTGTTCGCTCTCGTTCCTTATCCTCTTTCTCTCTCAACGTTACACCTCACAACACTGAAGAACTTCAACTTTCTTCTTCTTTCTCCAACGACGCCGTTTTACTTCCAATTCAAGAACAAGAACAAGAACAAGAACAATCATCTCCTCCAACTCCAGATGAAGATAAATCCACTACTAAGCTTAAAAAGAAGAAGAAGAAGGATCAAAATGATGAAGATAACAGTAACAACATCGATAACCGCTTCAAGCTCCGTAACGGAAGAGAGGTTTTTGAAGAGAAAGCGTATCTGGTTGGTGTTGAGAGAAAAGGTGAAGTTAGTGATTCCTTTGGTATAGAAGATTCTTTGAGTGAATTGGAACAGTTAGCTGATACTGCTGGATTATTGGTTGTTGCCTCTACTTACCAGAAGCTTGCTTCTCCAAACCCTAGGACGTACATTGGCTCTGGTAAAGTTTCTGAAATTAAGAGTGCAATTAATGCATTGGACGTTGAAACTGTGATATTTGATGATGAACTATCAGCTGGGCAACTGCGCAACCTGGAAAAGGTTTTTGGTGGAGATGTGAGAGTTTGCGATCGAACTGCTCTAATCCTTGATATATTTAATCAGCGAGCAGCAACACATGAAGCATCTTTACAGGTTGCATTAGCACAAATGGAATACCAACTACCTCGTCTAACAAAAATGTGGACTCATCTTGAGCGTCAATCAGGAGGACAGGTTAAAGGAATGGGTGAAAAACAAATAGAAGTGGACAAGCGTATTTTGCGTAACCAAATCGGTGTTCTTAAAAAAGAGCTAGAATCTGTTAGGAAACACCGAAAGCAGTACCGTAACAGGCGTCTCTCAGTACCTGTGCCAGTGGTATCCTTGGTTGGTTATACGAATGCTGGTAAGAGTACGCTTTTGAATCAATTAACTGGAGCAGATGTTCTTGCCGAGGATAAACTATTTGCAACTTTAGATCCAACTACAAGGAGAGTACAGATGAAGAATGGAAAGGAGTTTCTCCTAACAGACACTGTTGGTTTTATTCAGAAGTTACCTACTACACTAGTTGCTGCCTTCAGAGCCACACTGGAGGAGATATCAGAGTCATCACTTTTGGTGCATGTGATTGATATCAGTCACCCCCTGGCCGAGCAACAGATAAATGCTGTGGACAAAGTTCTGTCAGAACTAGATGTATCATCAATTCCGAAGTTGATGGTCTGGAACAAGATTGATAGGGCTAGTGATCCCCAGAAAATCAGGCTAGAAGCTGGAAAAAGAGATGATGTTGTATGCATATCTGCCTTAAGTGGCGATGGCATACAAGAATTCTGTAATGCAGTTCAAGACAAACTAAAGGACTCCATGGTATGGGTGGAAGCTTTGTTACCATTTGAAAATGGGGACCTTCTCAGCACCATACACCAAGTTGGAATGGTTGAGAAAACTGAATATACCGAGCAAGGGACATATATCAAGGCTCATGTGCCCCTACGTTTTGCGAGGTTGCTTACACCTATGAGACAACTGTGTGTACCACGACCTTAA 1683 0.4088 MMRCACVNGGSVILQSSSSSSSSSSIQFQFQFQQQRYYHHNHQRYLNLVRSRSLSSFSLNVTPHNTEELQLSSSFSNDAVLLPIQEQEQEQEQSSPPTPDEDKSTTKLKKKKKKDQNDEDNSNNIDNRFKLRNGREVFEEKAYLVGVERKGEVSDSFGIEDSLSELEQLADTAGLLVVASTYQKLASPNPRTYIGSGKVSEIKSAINALDVETVIFDDELSAGQLRNLEKVFGGDVRVCDRTALILDIFNQRAATHEASLQVALAQMEYQLPRLTKMWTHLERQSGGQVKGMGEKQIEVDKRILRNQIGVLKKELESVRKHRKQYRNRRLSVPVPVVSLVGYTNAGKSTLLNQLTGADVLAEDKLFATLDPTTRRVQMKNGKEFLLTDTVGFIQKLPTTLVAAFRATLEEISESSLLVHVIDISHPLAEQQINAVDKVLSELDVSSIPKLMVWNKIDRASDPQKIRLEAGKRDDVVCISALSGDGIQEFCNAVQDKLKDSMVWVEALLPFENGDLLSTIHQVGMVEKTEYTEQGTYIKAHVPLRFARLLTPMRQLCVPRP 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01815 560 FunFam GTPase HflX 334 503 - -
Mepo4g01815 560 Pfam HflX C-terminal domain 467 535 IPR045498 -
Mepo4g01815 560 PRINTS GTP1/OBG GTP-binding protein family signature 337 357 IPR006073 GO:0005525
Mepo4g01815 560 PRINTS GTP1/OBG GTP-binding protein family signature 404 422 IPR006073 GO:0005525
Mepo4g01815 560 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 335 508 IPR027417 -
Mepo4g01815 560 Pfam 50S ribosome-binding GTPase 337 455 IPR006073 GO:0005525
Mepo4g01815 560 NCBIfam small GTP-binding protein domain 336 492 IPR005225 GO:0005525
Mepo4g01815 560 MobiDBLite consensus disorder prediction 102 128 - -
Mepo4g01815 560 CDD HflX 294 497 IPR030394 GO:0005525
Mepo4g01815 560 Pfam GTP-binding GTPase N-terminal 160 249 IPR025121 -
Mepo4g01815 560 PANTHER GTP-BINDING PROTEIN HFLX 63 544 IPR016496 GO:0005525
Mepo4g01815 560 Coils Coil 308 328 - -
Mepo4g01815 560 ProSiteProfiles HflX-type guanine nucleotide-binding (G) domain profile. 335 501 IPR030394 GO:0005525
Mepo4g01815 560 Hamap GTPase HflX [hflX]. 163 526 IPR016496 GO:0005525
Mepo4g01815 560 Gene3D - 334 502 IPR027417 -
Mepo4g01815 560 FunFam Predicted protein 154 276 - -
Mepo4g01815 560 Pfam GTP-binding GTPase Middle Region 252 329 IPR032305 -
Mepo4g01815 560 MobiDBLite consensus disorder prediction 86 101 - -
Mepo4g01815 560 Gene3D - 253 320 - -
Mepo4g01815 560 MobiDBLite consensus disorder prediction 86 128 - -
Mepo4g01815 560 NCBIfam GTPase HflX 142 496 IPR016496 GO:0005525
Mepo4g01815 560 Gene3D - 154 252 IPR042108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01815 Mepo-Chr4 23368169 23375063 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g01815 4 23368169 23375063 Mepo4g01815 4 23368169 23375063 ECH