Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01787 ATGAGTTGGAGAATTTTTCTTTCTTCTTCAAAACAAACCCTAACCAAACTCAAATCAATCTCAAATTCCCAATTCTCCAAAACCCTCTTCAAACAATTACCCATTTCATCATCAATCATCACTCACCGAACTCTCCATTTCCATTCCCATGAATCCAGCACTTCACTGATCGATCCATCACTCAAATCCCACTTAAACGACACCACAATCCACCAAAACGACGATGAAGAAATCACCAACGAGTTTCTCTCTCGATTCGCTTGGATAATGCGGAAAAAAGTTAAAGAAGTTTATCCCGAATGCGATAAAAGTACCGTCGATGCAATGCTGCTTGTTATTGTTGAAAGGGTTGTTTCAGAAATGGAAAAGGGCAGCGGGAGTGATGAAAAGGTTTCACTTTCGCGATTTGATTCGGTGGATTTTAGTGAGGATTTATGGAGGACTGTGTGGGAGGTTAGTAATAAGGTTTTGGTTGATATGAATAAAGAGAGGAAGAAGGAGAAAATGAAAGGGTTTTTGCAGTGTGATGAAGTGAAAGAGATGTGTAGATTTGCCGGAGAAGTTGGGATTCGGGGCGATTTGCTTAGAGAGCTTAGGTTTAAATGGGCACGTGAGAAAATGGAGGAACATGAGTTTTATGAGGATTTGGAGAAAATGAGGAAAGAGACTCAGATTATTGATGAAGAAATCAAAAATGAAGCCGAAGGAAATGTCGATGTTGATGTTGGTGTTCGTGTTGATGGTAATGTTGAGGAGAAGAAGGTTGTTGTCCTTCCTAAGAGGAAAGGGAAAATTAAGTTTAAGATTTATGGGCTTGATCTATCGGATCCTAAATGGGAACAAGTGGCTGATAAGATTCATGAGGCGGGAGAAGTTATTTGGCCGAAGGAGGCGAAGCCGATAACCGGGAAATGCAAACAAGTTACCGAGAAAATTCTGTCGTTGAAGGAGAAGGATGGAGATGATAGTTTGTTGACCCTGGTAGCTGAATGGGTAGAGCTTCTACAGCCTACTAGGGTGGATTGGATCAATTTGCTTGAAAGGTTGAAAAATCAGAATTATCCTTTATACTTCAAGGTGGCAGAAATGGTATTAACTGAAGATTCTTTCCAAGCAAATATATCTGACTACTCTAGGCTTATTGATATGTATGCTAAAGACAACCGCATTGATGATACTGAGAGGATGCTTAAGAAGATGAATGAAAATGGTTTACAACCAGATGCTTCGATAGCCAATGTGATGGTCCACATGTACAGCAAGATAGGTAATCTTGAACGTGCAGAAGAAGCATTTAAAATCTTGAGTAGCCTGGGTTTCCAACCAGACACGAGAGTCTACAACTCAATGATCATGGCCTATATCAATGCTGGTGAACCTACAAAGGGTGAAACACTGATGAGGCAGATGGAGACGAGAGATATTAAGCCTACAAAGGAAATATACATGTCATTGCTCCGATATTATTCTCAACGTGGCGACATTGATCGTGCCTCACGAACTTCAACATCTCTGCAGTTTGCAGGACACCCGCAGACTATGGAAACATGCACCCTGCTTATTGAAGCAGCAGCAGTTGCAGGTGACCTAGATAAGGTAATCTTCAATTTTGACCATATGGTAAAACTTGGGCATAAGCCTGATGATAGATGCACTGCTGCCATGATTCGCGCTTATGAGAAAACAAATTTATTGGACAAGGCATTAGATCTTCTTATGACGTTAGAGAAGGATGGGTTTGAGCCTGGGATTGTGACTTATTCTGTTCTTCTGGACTGGATGGCTAAAATGCAGCTTGTCGATGAGGCTGAACAGATTTTAAACAAAATTGCTCTGCTGGGCGAGGCTCCTCCTTTTAGGGTTCAAGTTAGTCTTTGTGATATGTATGCAAGGACTAAAATGGAGAAAAAGGCCCTTCAAACACTAGGCGTTCTGATAGCTAGGAAGGAAGAATTACGACCAAATGAGTTTGAGAGGATTATATCTGGCCTTATTGATGGTGGGTTTTTGCGGGATGCGCAAAGAATGCATGGGATTATGGAGGCACAGGGTTTCAAACCATCTCAACAGCTTAATTTAGCCCTTAAATCTGGCCGCTTACCATTAAGTATGAGGTAG 2118 0.4127 MSWRIFLSSSKQTLTKLKSISNSQFSKTLFKQLPISSSIITHRTLHFHSHESSTSLIDPSLKSHLNDTTIHQNDDEEITNEFLSRFAWIMRKKVKEVYPECDKSTVDAMLLVIVERVVSEMEKGSGSDEKVSLSRFDSVDFSEDLWRTVWEVSNKVLVDMNKERKKEKMKGFLQCDEVKEMCRFAGEVGIRGDLLRELRFKWAREKMEEHEFYEDLEKMRKETQIIDEEIKNEAEGNVDVDVGVRVDGNVEEKKVVVLPKRKGKIKFKIYGLDLSDPKWEQVADKIHEAGEVIWPKEAKPITGKCKQVTEKILSLKEKDGDDSLLTLVAEWVELLQPTRVDWINLLERLKNQNYPLYFKVAEMVLTEDSFQANISDYSRLIDMYAKDNRIDDTERMLKKMNENGLQPDASIANVMVHMYSKIGNLERAEEAFKILSSLGFQPDTRVYNSMIMAYINAGEPTKGETLMRQMETRDIKPTKEIYMSLLRYYSQRGDIDRASRTSTSLQFAGHPQTMETCTLLIEAAAVAGDLDKVIFNFDHMVKLGHKPDDRCTAAMIRAYEKTNLLDKALDLLMTLEKDGFEPGIVTYSVLLDWMAKMQLVDEAEQILNKIALLGEAPPFRVQVSLCDMYARTKMEKKALQTLGVLIARKEELRPNEFERIISGLIDGGFLRDAQRMHGIMEAQGFKPSQQLNLALKSGRLPLSMR 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01787 705 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 548 582 IPR002885 -
Mepo4g01787 705 Gene3D Tetratricopeptide repeat domain 349 508 IPR011990 GO:0005515
Mepo4g01787 705 Gene3D Tetratricopeptide repeat domain 509 660 IPR011990 GO:0005515
Mepo4g01787 705 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 373 407 IPR002885 -
Mepo4g01787 705 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 443 477 IPR002885 -
Mepo4g01787 705 Pfam Pentatricopeptide repeat domain 538 594 IPR002885 -
Mepo4g01787 705 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 408 442 IPR002885 -
Mepo4g01787 705 PANTHER OS07G0661900 PROTEIN 89 695 - -
Mepo4g01787 705 Pfam Pentacotripeptide-repeat region of PRORP 385 497 IPR033443 -
Mepo4g01787 705 NCBIfam pentatricopeptide repeat 446 478 IPR002885 -
Mepo4g01787 705 NCBIfam pentatricopeptide repeat 377 409 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01787 Mepo-Chr4 23136638 23141449 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g01787 4 23136638 23141449 Mepo4g01787 4 23136638 23141449 ECH