Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01778 ATGTCCTCAAGTTCAGATTGGACAACAAAGCAGAACAAAAGATTTGAGAATGCTTTGGCCATCTATGATAAGGACACCCCAGATAGGTGGCAGAAGCTAGCAAGGGCTGTTGGAGGGAAGACAGTTGAGGAAGTGAAAAGGCATTATGAGATGTTAGTTGAAGACTTGAAGCAAATTGAGGAAGGTCATGTTCCTTTGCCCAAATACAGAAATGCTGCAACAATTAAAGGTTACAATTACAGTGACGAAGAACAAAGGTTGAAGTATCTAAGCCTTCAGTGA 282 0.4113 MSSSSDWTTKQNKRFENALAIYDKDTPDRWQKLARAVGGKTVEEVKRHYEMLVEDLKQIEEGHVPLPKYRNAATIKGYNYSDEEQRLKYLSLQ 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01778 93 SMART sant 3 55 IPR001005 -
Mepo4g01778 93 Gene3D - 1 66 - -
Mepo4g01778 93 ProSiteProfiles Myb-like domain profile. 1 53 IPR001005 -
Mepo4g01778 93 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 2 82 IPR044636 GO:0003700
Mepo4g01778 93 CDD SANT 7 53 IPR001005 -
Mepo4g01778 93 SUPERFAMILY Homeodomain-like 6 60 IPR009057 -
Mepo4g01778 93 Pfam Myb-like DNA-binding domain 6 52 IPR001005 -
Mepo4g01778 93 ProSiteProfiles SANT domain profile. 2 57 IPR017884 -
Mepo4g01778 93 FunFam Transcription factor SRM1 1 66 - -
Mepo4g01778 93 Coils Coil 42 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01778 Mepo-Chr4 23080852 23081982 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo4g01778 Myb_DNA-binding 1.1e-05 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g01778 4 23080852 23081982 Mepo4g01778 4 23080852 23081982 ECH
Mepo4g01778 4 23080852 23081982 Mepo3g07937 3 92292108 92293094 PCT