Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01738 ATGGGTTGGCTTAGTAGAATTTTTAAAGGGTCTGATCATAAGGTTTCAGAAGGGCATTATTATAGAGACGATTCGAGTTATTACTTGCCATCAACTTCAGGGGATGTTTGGACCGAGAACGAGAATGAAGATATTGATCGTGCTATTGCGTTGTCTTTGGTAGAAGAAAATCAGAAAGTGAAAAATGTAAAAGACCACAAATCACAATTAGAAGAAGATGAACTACTTGCCAGAGCAATAGAAGAAAGTCTAAATTTGGAGTCACCTCCCAAACATGGAAATGATAATATGCATCAACCAATTCAGTATTTCCCAATGGGGTACAGGATATGTGCTGGCTGCAATGCTGAGATTGGTTATGGCCGCTATCTAAATTGCTTGGGTGCATTCTGGCATCCTGAATGCTTCCGTTGCCGTGCTTGCAACCTACCAATCTCTGATTATGAGTTTTCCACGTCTGGAAATTACCCTTTCCATAAAGCATGCTATAAGGAAAGCTACCATCCGAAATGTGATGTCTGCAAGCACTTCATTCCAACAAACCCTGCTGGTCTTATTGAATATAGGGCACACCCATTCTGGAACCAGCATTATTGCCCTTCACATGAACATGATAACACTGCCCGCTGTTGTAGCTGTGAGCGAATGGAGCCAAAAGGGACGGGATATATTGCCCATAAGGATGGAAGGAAGCTCTGCTTAGAGTGTCTTGATTCTGCTATCATGGATACTAATGAATGTCAGCCCCTTCATGCTGATATACTGAAGTTCTATGAAAGCATAAATATGAAACTGAATCAGCAAGTTCCTCTACTTTTGGTTGAAAGACAAGCACTGAATGAAGCGAGGGAGGGGGAAAAGAATGGCCACTATCATATGCCTGAGACCAGAGGACTCTGCCTCTCAGAGGAACTCAGCACTTTTTCAAGACGACCTAGACTCGGCACAGGAAATAGAGACACGAGAGCACAGCCATACAAACTGACTGCACGCTGTGATGTGACTGCAATTCTCATTCTATATGGTCTTCCAAGATTACTTACCGGATCGATTCTAGCTCATGAGATGATGCATGCATGGCTGCGGCTAACAGGTTTTCGGACTCTAAGTCAAGATGTTGAAGAAGGTATCTGTCAGGTTTTGGCTCACATGTGGTTGGAGTCTGAGCTTTCTTCTGGACCAGGCAGCAACTTTGCATCAGCCTCATCCTCATCTGCATCATATACATCTAAGACAGGTAAAAGACCTCCGTTTGAGAAGAAGCTTGGGGAGTTCTTCAAGCACCAGATTGAATCAGACATTTCCCCTGTTTATGGAGATGGGTTTAGAGCCGGTCAAAAAGCAGTTCGCAAGTATGGCCTAGAAAGGACCCTTCACCATATCAAGATGACGGGTGGTTTCCCATATTAA 1410 0.4348 MGWLSRIFKGSDHKVSEGHYYRDDSSYYLPSTSGDVWTENENEDIDRAIALSLVEENQKVKNVKDHKSQLEEDELLARAIEESLNLESPPKHGNDNMHQPIQYFPMGYRICAGCNAEIGYGRYLNCLGAFWHPECFRCRACNLPISDYEFSTSGNYPFHKACYKESYHPKCDVCKHFIPTNPAGLIEYRAHPFWNQHYCPSHEHDNTARCCSCERMEPKGTGYIAHKDGRKLCLECLDSAIMDTNECQPLHADILKFYESINMKLNQQVPLLLVERQALNEAREGEKNGHYHMPETRGLCLSEELSTFSRRPRLGTGNRDTRAQPYKLTARCDVTAILILYGLPRLLTGSILAHEMMHAWLRLTGFRTLSQDVEEGICQVLAHMWLESELSSGPGSNFASASSSSASYTSKTGKRPPFEKKLGEFFKHQIESDISPVYGDGFRAGQKAVRKYGLERTLHHIKMTGGFPY 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01738 469 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 40 59 IPR003903 -
Mepo4g01738 469 SMART lim_4 110 162 IPR001781 -
Mepo4g01738 469 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 104 136 - -
Mepo4g01738 469 Coils Coil 53 73 - -
Mepo4g01738 469 Pfam LIM domain 111 164 IPR001781 -
Mepo4g01738 469 ProSitePatterns LIM zinc-binding domain signature. 111 145 IPR001781 -
Mepo4g01738 469 ProSiteProfiles LIM domain profile. 109 169 IPR001781 -
Mepo4g01738 469 Gene3D Cysteine Rich Protein 107 170 - -
Mepo4g01738 469 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 71 90 IPR003903 -
Mepo4g01738 469 CDD LIM_DA1 111 163 - -
Mepo4g01738 469 SMART uim 71 90 IPR003903 -
Mepo4g01738 469 SMART uim 40 59 IPR003903 -
Mepo4g01738 469 FunFam Protein DA1-related 1 105 164 - -
Mepo4g01738 469 PANTHER PROTEIN DA1-RELATED 2 3 468 IPR045218 -
Mepo4g01738 469 Pfam Protein DA1 261 464 IPR022087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01738 Mepo-Chr4 22652175 22658564 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mepo4g01738 DA1-like 7.9e-91 CL0126
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g01738 4 22652175 22658564 Mepo4g01738 4 22652175 22658564 ECH