Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00334 ATGGGAACGGAGAGTTACACATACATGGGAAGAAGTTTCAACGAATTCACCATCAACGACGATTCAACTTCCTCCGCTTTCAGCGACTGCAACAGTGACAGATCCGGCGAATTCGCCACCACTTCTTCTACCTCCCGACGACTCTTCCTCGCCTGTGCTTCCGAAAATTCCGATGACCTCATCCGTCAACTCGTCTCCGATCTTCACTCCGATTCAATCGAAGAACAGAAACAAGCTGCCATGGAAATTCGATTACTCGCCAAGAATAAACCAGAAAATCGAATCAAAATTGCTAAAGCTGGCGCAATTAAACCGTTAATTTCGTTAGTTACTTCACAGGACCTGCAACTTCAAGAATACGGTGTTACTGCAATTTTGAATCTCTCTTTATGCGACGAGAATAAAGAACTAATAGCTTCTTCCGGAGCTATTAAGCCGTTAGTTAGAGCGTTAAATTCAGGAACATCAACGGCTAAAGAGAACGCGGCGTGTGCGCTCCTTCGTCTATCTCAGGTGGAAGAGAACAAGGCGGCGATTGGAAGATCCGGTGCAATTCCGTTATTAGTGAATCTTCTAGGAAGCGGAGGAATACGCGGGAAGAAAGACGCGTCTACGGCGCTGTATACTCTGTGTTCTGTGAAGGAGAATAAGATGAGAGCGGTGAAAGCGGGGATAATGAAGGTGTTAGTTGAGTTGATGGCGGATTTTGAATCCAATATGGTGGATAAATCGGCTTATGTTTTGAGTGTGTTGGTATCGGTGCCGGAGGCGAAGGTTGCGCTGGTGGAGGAAGGTGGTGTACCGGTGTTGGTTGAGATTGTGGAGGTTGGATCGCAGAGACAGAAGGAAATTGCGGCGGTAATTCTGTTACAGATTTGTGAAGATAGCGTGGCGGTTCGATCCATGGTGGCTCGTGAAGGTGCCATTCCTCCTTTGGTTGCTTTGACGCAGTCCGGCACCAATCGCGCCAAACAAAAGGCTGAGAAACTAATTGAGCTTCTGAGGCAACCAAGATCTACACGTACATCAGAATGA 1035 0.4715 MGTESYTYMGRSFNEFTINDDSTSSAFSDCNSDRSGEFATTSSTSRRLFLACASENSDDLIRQLVSDLHSDSIEEQKQAAMEIRLLAKNKPENRIKIAKAGAIKPLISLVTSQDLQLQEYGVTAILNLSLCDENKELIASSGAIKPLVRALNSGTSTAKENAACALLRLSQVEENKAAIGRSGAIPLLVNLLGSGGIRGKKDASTALYTLCSVKENKMRAVKAGIMKVLVELMADFESNMVDKSAYVLSVLVSVPEAKVALVEEGGVPVLVEIVEVGSQRQKEIAAVILLQICEDSVAVRSMVAREGAIPPLVALTQSGTNRAKQKAEKLIELLRQPRSTRTSE 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00334 344 SUPERFAMILY ARM repeat 57 332 IPR016024 -
Mepo4g00334 344 FunFam RING-type E3 ubiquitin transferase 50 340 - -
Mepo4g00334 344 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 101 143 IPR000225 GO:0005515
Mepo4g00334 344 Gene3D - 214 342 IPR011989 -
Mepo4g00334 344 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 142 184 IPR000225 GO:0005515
Mepo4g00334 344 SMART arm_5 172 212 IPR000225 GO:0005515
Mepo4g00334 344 SMART arm_5 254 294 IPR000225 GO:0005515
Mepo4g00334 344 SMART arm_5 213 253 IPR000225 GO:0005515
Mepo4g00334 344 SMART arm_5 131 171 IPR000225 GO:0005515
Mepo4g00334 344 SMART arm_5 90 130 IPR000225 GO:0005515
Mepo4g00334 344 Pfam Armadillo/beta-catenin-like repeat 91 129 IPR000225 GO:0005515
Mepo4g00334 344 Pfam Armadillo/beta-catenin-like repeat 132 170 IPR000225 GO:0005515
Mepo4g00334 344 Pfam Armadillo/beta-catenin-like repeat 174 212 IPR000225 GO:0005515
Mepo4g00334 344 Gene3D - 37 200 IPR011989 -
Mepo4g00334 344 PANTHER U BOX DOMAIN-CONTAINING 60 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00334 Mepo-Chr4 5149943 5152322 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00334 47 338 U-box Gene Family AT2G23140 49.329 3.23e-85 268
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g00334 4 5149943 5152322 Mepo3g07209 3 85688910 85692606 PCT