Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00310 ATGGAACCAAAGAGCGTTAACCCCACGCGCCGCCCTCAACGTGAAGCAAAGAAAAAAGCCGTTGCTGCACTATGTGAACAGCAACGCAAACGAAAACGCGTTCCTCTCGGTGAAATTACAAACGACTTTAACACAAACGCAAACGCAAACGACGTCGTTTTACCAACGCAGAAAAAACAACACGTTGCCACTTCATCAAACTCCGATGAAACTCCGGTACCGGAGAAATTGGAGAAATTCGAAGATCCTCAGTTATGTGAAACTTATGTTTCTGATATTTACGATTATCTTCGTAATATGGAGGTTGATTCTAGTAAGAGGCCATTGTGTGATTATATACAGAAAGTTCAGAGGGATGTTAATGCGAGTATGAGGGGTGTTCTTGTGGATTGGTTGGTTGAAGTTGCTGAAGAATACAAGCTTGTTTCAGATACGCTTTATTTTTCGGTTTCTTATATCGATCGGTTTTTGTCGTTGAATGATTTAACCAGACAGAAGTTGCAATTACTCGGTGTTGCTTCGATGTTGGTTGCTTCAAAATATGAAGAGATTAAGCCACCTGAGGTTGAGGACTTTTGTTACATTACGGACAATACATACTCCAAGGAAGAGGTTTTGAGCATGGAGGCTGATATTTTGAAATCTTTGAAGTTTGAATTGGGTGGTCCTACAATAAAGACATTCCTAAGAAGATTCATCACTAAAGTTGGTCTAGAGGGTGTTGATGCTTCTGAGTTGCAGTTTGAGTTCCTTTGCTCTTACCTTGCTGAGCTCAGTTTGTTGGATTATAATTGTGTGAAGTTCTTGCCTTCTATGGTGGCTGCATCAGTTGTATTTCTTGCACGTTTTATGTTAAGCCCAAAGACTCATCCTTGGAATTCAGCCATCTATGAATTCACCAGATATAAACCTGCAGACTTGAAGGAATGTGTTCTAAATATACATGACTTGTACCTTGGTAGGAAAGGTGGCGTTTTGCAAGCTGTGAGAGATAAATACAAACAGCATAAGTTCAAATGTGTGGCAACAACACCCTCTCCCCCGGAGATATCTCTTTCTTTTTTTGAATTTAGAGGGGCTGATCCTTAG 1089 0.4059 MEPKSVNPTRRPQREAKKKAVAALCEQQRKRKRVPLGEITNDFNTNANANDVVLPTQKKQHVATSSNSDETPVPEKLEKFEDPQLCETYVSDIYDYLRNMEVDSSKRPLCDYIQKVQRDVNASMRGVLVDWLVEVAEEYKLVSDTLYFSVSYIDRFLSLNDLTRQKLQLLGVASMLVASKYEEIKPPEVEDFCYITDNTYSKEEVLSMEADILKSLKFELGGPTIKTFLRRFITKVGLEGVDASELQFEFLCSYLAELSLLDYNCVKFLPSMVAASVVFLARFMLSPKTHPWNSAIYEFTRYKPADLKECVLNIHDLYLGRKGGVLQAVRDKYKQHKFKCVATTPSPPEISLSFFEFRGADP 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00310 362 PIRSF Cyclin_A_B_D_E 1 354 IPR046965 GO:0016538|GO:0044772
Mepo4g00310 362 ProSitePatterns Cyclins signature. 125 156 IPR006671 -
Mepo4g00310 362 Pfam Cyclin, C-terminal domain 223 346 IPR004367 -
Mepo4g00310 362 PANTHER CYCLINS 60 341 IPR039361 -
Mepo4g00310 362 FunFam Mitotic cyclin 6 108 208 - -
Mepo4g00310 362 FunFam Cyclin A1 210 343 - -
Mepo4g00310 362 Pfam Cyclin, N-terminal domain 92 220 IPR006671 -
Mepo4g00310 362 SMART cyclin_7 227 316 IPR013763 -
Mepo4g00310 362 SMART cyclin_7 130 214 IPR013763 -
Mepo4g00310 362 CDD CYCLIN_AtCycA-like_rpt2 223 338 - -
Mepo4g00310 362 SUPERFAMILY Cyclin-like 223 348 IPR036915 -
Mepo4g00310 362 SMART Cyclin_C_2 223 347 IPR004367 -
Mepo4g00310 362 Gene3D - 106 221 - -
Mepo4g00310 362 Gene3D - 92 343 - -
Mepo4g00310 362 SUPERFAMILY Cyclin-like 81 220 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00310 Mepo-Chr4 4776959 4780257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00310 7 356 Core Cell Cycle Gene Families AT1G47230 58.939 7.99e-143 407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g00310 4 4776959 4780257 Mepo4g00310 4 4776959 4780257 ECH
Mepo4g00310 4 4776959 4780257 Mepo3g07176 3 85412137 85414296 PCT