Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00293 ATGGAAGAAGAAGATAGGGAATATTGTTGTTCGATGAATTCAAGAACCAATAGCCCTATAGATCATAAAAATAACAATAACAATAAGGGGATGAAAAAAGAGAAAAAAGCTATGAAACCATATAGAGGAATAAGGATGAGAAAGTGGGGTAAATGGGTAGCAGAGATTAGAGAACCAAACAAGAGATCAAGAATTTGGTTAGGTTCTTACATAACACCTATTGCTGCTGCACGTGCTTATGACACTGCTGTGTTTTATCTTAGAGGTCCTTCTGCAAACCTTAATTTTCCTGAATTGTTGTTCAAAGACCAACAAGAAGATGAAGAAAATCTACAACAACGTGGGAATATGTCGGCTGATTCAATAAGGAAAAAAGCTACACAAGTTGGTGCTAGAGTTGATGCTCTTGAAACTAATTCTCTAATTAATCATCATCATCATCATCATCATGTTTCTTCCAATAATCATGTTCACTCCAATTCTACTTCTTCTCTCAAACCTGACTTGAATGAGTTTCCAAAACCTGAAGATTGTTGA 537 0.3538 MEEEDREYCCSMNSRTNSPIDHKNNNNNKGMKKEKKAMKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYITPIAAARAYDTAVFYLRGPSANLNFPELLFKDQQEDEENLQQRGNMSADSIRKKATQVGARVDALETNSLINHHHHHHHVSSNNHVHSNSTSSLKPDLNEFPKPEDC 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00293 178 Pfam AP2 domain 41 89 IPR001471 GO:0003700|GO:0006355
Mepo4g00293 178 PRINTS Ethylene responsive element binding protein signature 79 99 IPR001471 GO:0003700|GO:0006355
Mepo4g00293 178 PRINTS Ethylene responsive element binding protein signature 41 52 IPR001471 GO:0003700|GO:0006355
Mepo4g00293 178 SUPERFAMILY DNA-binding domain 40 98 IPR016177 GO:0003677
Mepo4g00293 178 CDD AP2 41 99 IPR001471 GO:0003700|GO:0006355
Mepo4g00293 178 ProSiteProfiles AP2/ERF domain profile. 40 97 IPR001471 GO:0003700|GO:0006355
Mepo4g00293 178 MobiDBLite consensus disorder prediction 11 35 - -
Mepo4g00293 178 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 19 177 - -
Mepo4g00293 178 SMART rav1_2 40 103 IPR001471 GO:0003700|GO:0006355
Mepo4g00293 178 FunFam Ethylene-responsive transcription factor 2 39 98 - -
Mepo4g00293 178 Gene3D AP2/ERF domain 40 98 IPR036955 GO:0003700|GO:0006355
Mepo4g00293 178 PIRSF PTI6 122 174 IPR017392 GO:0003700
Mepo4g00293 178 PIRSF PTI6 8 144 IPR017392 GO:0003700
Mepo4g00293 178 MobiDBLite consensus disorder prediction 11 25 - -
Mepo4g00293 178 MobiDBLite consensus disorder prediction 146 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00293 Mepo-Chr4 4531491 4532561 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00293 30 177 AP2-EREBP Transcription Factor Family AT2G23340 56.000 1.58e-52 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mepo4g00293 AP2 4.4e-11 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g00293 4 4531491 4532561 Mepo4g00293 4 4531491 4532561 ECH