Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00290 ATGAAGGTGCATCAATTCACACGTGGATTTTGGGAGCATGAACCTTCCCTAACACTTGGTTGCAAGCGTTTACGTCCTCTTGCACCTAAAATTTCTTCTAATAACACCGATAATTCTACTACTAACACCCCTTCTCTCTCTTTTGATCTCAAGAGTTTCATTAGACCTGAAAGTGCTCCCAGAATTAGTCTTTCTTCCTCTGATGATAACAAGAAAGATCCACCTTCACCACAAAGCCAGGTTGAAACGCATATTCCAGGAGGGACAAGGTGGAATCCAACACAAGAACAAATAGGAATATTGGAGATGTTATACAGAGGTGGAATGAGAACACCAAATGCACAACAAATAGAACAGATCACAGTTCAACTTAGCAAGTATGGTAAAATTGAAGGGAAAAATGTGTTCTATTGGTTCCAAAACCACAAAGCACGCGAGAGACAAAAGCAGAAACGTAACAGTCTTGGCCTTCCTCATAGTCCTCGAACTCCCACCACCACACTTGTGTCTGTGTCCCCCACCTTTAGTACTATTACAACTTTGGACACCCCAAAAAGGGTGCAAGTAATGGAAAGAGATCAAGAAGATATCCCATTGAAGAAGAGTAGGAGTTGGCCATTTGAGTATTTGGAAGAGAAAAATTGGTCAATGTGCAAAGTAGAGGAACATAAAACTCTAGAGCTTTTCCCGTTACACCCAGAAGGCAGATGA 711 0.4149 MKVHQFTRGFWEHEPSLTLGCKRLRPLAPKISSNNTDNSTTNTPSLSFDLKSFIRPESAPRISLSSSDDNKKDPPSPQSQVETHIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPRTPTTTLVSVSPTFSTITTLDTPKRVQVMERDQEDIPLKKSRSWPFEYLEEKNWSMCKVEEHKTLELFPLHPEGR 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00290 236 MobiDBLite consensus disorder prediction 147 169 - -
Mepo4g00290 236 SUPERFAMILY Homeodomain-like 88 155 IPR009057 -
Mepo4g00290 236 CDD homeodomain 89 150 IPR001356 GO:0003677
Mepo4g00290 236 Gene3D - 88 155 - -
Mepo4g00290 236 MobiDBLite consensus disorder prediction 59 93 - -
Mepo4g00290 236 PANTHER WUSCHEL-RELATED HOMEOBOX 4 1 236 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Mepo4g00290 236 ProSiteProfiles 'Homeobox' domain profile. 94 149 IPR001356 GO:0003677
Mepo4g00290 236 MobiDBLite consensus disorder prediction 29 93 - -
Mepo4g00290 236 FunFam WUSCHEL-related homeobox 4 88 155 - -
Mepo4g00290 236 MobiDBLite consensus disorder prediction 154 169 - -
Mepo4g00290 236 MobiDBLite consensus disorder prediction 29 49 - -
Mepo4g00290 236 Pfam Homeodomain 89 148 IPR001356 GO:0003677
Mepo4g00290 236 SMART HOX_1 86 153 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00290 Mepo-Chr4 4504728 4506250 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00290 1 182 Wox Gene Family AT1G46480 58.549 4.30e-64 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Mepo4g00290 Homeodomain 1.5e-18 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g00290 4 4504728 4506250 Mepo4g00290 4 4504728 4506250 ECH