Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00276 ATGCAAGGGCAGAGAGGCACAATTGGTTCCTCATCTGAAACCTTCGAGTTTGACTGTGGATCTACATCAAGTACTGCTGCTGTTGATCAGCACATTTTTTGGAATAATATGCACACTCCTTCCGAAAATCGGATACCCGAATTTATGCTTTCCCCAAGTGAGATGAACCCGCCTCACGGGAATTCTCTAAACCATGAATGGCAGAACTTGAGCGGATGGAGCTTAGGAGAGCCAAGTTCCAGTAATACACAGAACGAAGTTAACAACAATGAGCTGAAAAGGGAGTTAGGGTTATCACCTCCGATAAATGGTGGTGCTATAGCTGGTCCAAGACTAGAAGAAAGGCACTTCGAACCAACTAATGCATTTTCATTGGATAATGTCAATACAGGTCCTATGTATATGTGCAGCCCCAATTCTCATTTGGTGCCACAAAATCTCAATTTAAATGCCAGTTTAACAGATAATGGCATCGATAATAGCTATCACGTGGAAGTTGAACATCCCAACATGCACAAATCCAGTGGTCCTCTAAATGAGCATATTCCACCTCCGATTAGTTCTGGTTCTTTTTTGCTTCCTTCTGGTGGAAGTAACAGCATTTATATTGGGGATACCGATGGTCGGCCAGGTTGTTCTCTAGACACCCGCCGTGTATCTTGTAAACGAAAGGCAGTTGAAGGAAATGGTGGACAATCTTCAGACGGTGGAAGTTCTAGCTATAGTCAGCATACAGTTGGCAGTGCTTGGAATACTCTTCCTACTCAGGATTATGCAGGGAACAATTTTAACCAATCTGCACCGGCAGAACAGGTGAATGCAAGACTTGGCCTGAGTGTTGGGGACGGATCTTCTGAAACCATACCTGGGTCAACTGTTGCAGGAAGCTCGGAAAGCTTCCACAGAAATTTTCGTTTGAGGATAAATCCTTCAAGCCAACAAATCCAACAAATTTCTCTTCCTCCAACCACATTCTCAAATGGGAGTGTAATCAGAAACTCTAGTGTTCCTTCATCTGCTCCAATATTGCAAAGGTACCACCCTATCAATAATCCTCTGGACTTGAGGTCAGTACAACCAGTAAATGTGATGCATCCTCAAAGCGAGCCTCTTCTGGTTCATGTTCCTGCGTTACCGAGGAGTGCGCAATCCATCAGGTGGAGTGGTGGTTCTAGCTCAACAAACAACCATTCGTCAAATTCAGTTTTAGGCTTAGATAGGGATAATCAACTACATGAGGAAGCAGGCTCAAGAGCTATGGCTAGAAACATTTTAGATCACCCAGTGTTTGTACCTGCAAATGTAAGAAATGCGGCTCGAAATCCAACTAGGTCTTCGAGCAGTGCAAACTTAAGTATTCCAGGAAATGTTGCTTCATCATCAAGAACTGTGCCAAATCCTCCAGCTTTGAATCCATCATCTGTCTCGGCGTGGGTTTCTCGTCCTAATCCTCAGCAGTATCCTCGTAGGTTATCTGAATATGTTCGTCGGTCCTTGTTTTCTCCTGGTTCTGAAGGTGGAAGTTCAAGCAATAACTATCCTTCCTTGCGTGGTCCTTCTACTTCGTCAGAATCAAGAAATCTGCCATCTGGGACCAACCCTGGATCATCTCCATGGTTGGAGAGGTCAGCTGATAGTGAATTTGGAATTCCCTATTCCTTACGATCGTTGGCTGCTGCTGGTGAAGGAAGTAGTAGACTTGTATCCGAGCTTCGCAATGTGTTGGGCATCATGCGTAGGGGTGGGAACCTGCGGTTTGAGGATGTTATGATTCTCGACCATTCAATGTTTGCTGGGATTGCTGATATGCATGATAGGCACAGGGATATGCGGCTTGATGTTGATAACATGTCTTATGAGGAGTTATTGGCTCTGGAAGAACGCATCGGAAATGTCAGCACAGGATTGAATGAGGAGACCATTATGAAACATTTGAAACAGAAGAAATACTCAGTTGATGGATTGGGTTCTCAGAGTGAGACAGAACCCTGCTGTGTTTGTCAGGAGGAGTTTAAAAATGAAGATGATATTGGATCGTTGGATTGCGGGCATGATTATCACATCGACTGTATTAAACAGTGGCTAACGCATAAGAATATCTGTCCAATTTGTAAGACAACAGGCTTGGCAACATGA 2136 0.441 MQGQRGTIGSSSETFEFDCGSTSSTAAVDQHIFWNNMHTPSENRIPEFMLSPSEMNPPHGNSLNHEWQNLSGWSLGEPSSSNTQNEVNNNELKRELGLSPPINGGAIAGPRLEERHFEPTNAFSLDNVNTGPMYMCSPNSHLVPQNLNLNASLTDNGIDNSYHVEVEHPNMHKSSGPLNEHIPPPISSGSFLLPSGGSNSIYIGDTDGRPGCSLDTRRVSCKRKAVEGNGGQSSDGGSSSYSQHTVGSAWNTLPTQDYAGNNFNQSAPAEQVNARLGLSVGDGSSETIPGSTVAGSSESFHRNFRLRINPSSQQIQQISLPPTTFSNGSVIRNSSVPSSAPILQRYHPINNPLDLRSVQPVNVMHPQSEPLLVHVPALPRSAQSIRWSGGSSSTNNHSSNSVLGLDRDNQLHEEAGSRAMARNILDHPVFVPANVRNAARNPTRSSSSANLSIPGNVASSSRTVPNPPALNPSSVSAWVSRPNPQQYPRRLSEYVRRSLFSPGSEGGSSSNNYPSLRGPSTSSESRNLPSGTNPGSSPWLERSADSEFGIPYSLRSLAAAGEGSSRLVSELRNVLGIMRRGGNLRFEDVMILDHSMFAGIADMHDRHRDMRLDVDNMSYEELLALEERIGNVSTGLNEETIMKHLKQKKYSVDGLGSQSETEPCCVCQEEFKNEDDIGSLDCGHDYHIDCIKQWLTHKNICPICKTTGLAT 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00276 711 MobiDBLite consensus disorder prediction 499 542 - -
Mepo4g00276 711 MobiDBLite consensus disorder prediction 384 406 - -
Mepo4g00276 711 MobiDBLite consensus disorder prediction 1 20 - -
Mepo4g00276 711 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 627 708 IPR013083 -
Mepo4g00276 711 MobiDBLite consensus disorder prediction 439 484 - -
Mepo4g00276 711 ProSiteProfiles Zinc finger RING-type profile. 664 705 IPR001841 -
Mepo4g00276 711 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 217 709 IPR045191 GO:0061630
Mepo4g00276 711 MobiDBLite consensus disorder prediction 231 246 - -
Mepo4g00276 711 MobiDBLite consensus disorder prediction 502 540 - -
Mepo4g00276 711 FunFam E3 ubiquitin-protein ligase MBR2 631 709 - -
Mepo4g00276 711 SUPERFAMILY RING/U-box 663 707 - -
Mepo4g00276 711 MobiDBLite consensus disorder prediction 223 246 - -
Mepo4g00276 711 Pfam Ring finger domain 664 705 IPR001841 -
Mepo4g00276 711 MobiDBLite consensus disorder prediction 168 190 - -
Mepo4g00276 711 SMART ring_2 664 704 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00276 Mepo-Chr4 4219208 4225789 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00276 1 711 C3H Transcription Factor Family AT2G15530 32.053 1.19e-70 242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g00276 4 4219208 4225789 Mepo4g00276 4 4219208 4225789 ECH