Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00274 ATGGCTTTCCTTCAAGACCAATTTCAACGCCACTACCAACAACAACAACAACAACAACCTCAACCACAAACCAAATCTTTCAGAAATTTACAAACAATTGAAGGTCAGATGTCGCAGCAGATGGCTTTTTACAACCCTACTGATTTGCAAGATCAGTCTCAGCATCCACCATACATTCCTCCATTTCATGTAGTTGGTTTTGCTCCGGGTCCTGTCATTCCGGCTGATGGAAGTGATGGTGGTGTTGATTTACATTGGAATTTCGGTTTGGAACCAGAGAGGAAAAGACTAAAAGAGCAAGATTTTTTGGAGAATAATTCTCAGATATCTTCTGTGGATTTCCTGCAACCTCGATCTGTGTCCACAGGGTTAGGATTGTCGCTTGATAACACTCGCCTGGCTTCAACCGGAGACTCGGCTTTATTGTCTCTCATAGGGGATGACATTGATCGCGAGTTACAGCAACAGGATTTAGAGATGGACAGATTTCTCAAACTGCAGGGTGAACAATTGCGGCAAACAATTTTAGAGAAAGTTCAGGCAACACAACTTCAAAGTGTTTCAATCATCGAAGACAAGGTCCTCCAAAAACTTCGAGAGAAAGAAACTGAGGTAGAAAACATCAACAAGAGGAATATGGAACTTGAAGATCAAATGGAGCAGCTGAGTGTAGAAGCAGGTGCATGGCAACAACGAGCCAGATATAACGAAAACATGATTGCTGCTCTCAAGTTTAACCTCCAACAGGCATATCTCCAAGGTAGGGACAGTAAAGAAGGGTGCGGTGACAGCGAGGTAGATGATACAGCTTCTTGCTGTAATGGTCGTTCACTTGATTTTCATCTGCTCTCCAACGAAAATTCCAATATGAAAGACTTGATGAAATGTAAGGCTTGCAGAGTCAACGAAGTGACCATGGTTTTATTACCTTGCAAGCATCTTTGCCTCTGTAAAGATTGTGAAAGTAAGCTTAGTTTTTGTCCTCTATGTCAATCCTCTAAATTCATCGGCATGGAGGTCTACATGTAA 1029 0.4208 MAFLQDQFQRHYQQQQQQQPQPQTKSFRNLQTIEGQMSQQMAFYNPTDLQDQSQHPPYIPPFHVVGFAPGPVIPADGSDGGVDLHWNFGLEPERKRLKEQDFLENNSQISSVDFLQPRSVSTGLGLSLDNTRLASTGDSALLSLIGDDIDRELQQQDLEMDRFLKLQGEQLRQTILEKVQATQLQSVSIIEDKVLQKLREKETEVENINKRNMELEDQMEQLSVEAGAWQQRARYNENMIAALKFNLQQAYLQGRDSKEGCGDSEVDDTASCCNGRSLDFHLLSNENSNMKDLMKCKACRVNEVTMVLLPCKHLCLCKDCESKLSFCPLCQSSKFIGMEVYM 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00274 342 PIRSF SBP1_RNase_bind 5 342 IPR017066 -
Mepo4g00274 342 ProSiteProfiles Zinc finger RING-type profile. 296 331 IPR001841 -
Mepo4g00274 342 FunFam probable BOI-related E3 ubiquitin-protein ligase 2 278 342 - -
Mepo4g00274 342 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 90 340 IPR017066 -
Mepo4g00274 342 CDD mRING-HC-C3HC5_CGRF1-like 296 330 - -
Mepo4g00274 342 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 282 342 IPR013083 -
Mepo4g00274 342 Pfam Zinc finger, C3HC4 type (RING finger) 294 332 - -
Mepo4g00274 342 Coils Coil 191 232 - -
Mepo4g00274 342 FunFam Baculoviral IAP repeat containing 7 305 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00274 Mepo-Chr4 4203792 4206225 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00274 296 332 Miscellaneous Gene Families AT4G39050 45.946 3.06e-07 50.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g00274 4 4203792 4206225 Mepo4g00274 4 4203792 4206225 ECH