Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00249 ATGCCTGTGTTTATCCCATCTGACAAACCAAAGAGGGTGTCGATGGACCAAATCAACTTCGAAAGGAACATTACAGAAAAATTGGAAAAGGCTGATATCAATAACGACGGTCGTTACACAAAGGAGGAACTCAAAAAAGCTCTAAAGGATTTAGGTGCGTACTTCCCTGAATTGAGAGCCATATTTTGTTTCATGAAAGCTGATGCCAACAAAGACGGACAAATTAGTGGCGAGGAAATCGACACTTTAATTGATTATCTCCTTACTCGTGGTTTTGGCAAGAACTAA 288 0.3993 MPVFIPSDKPKRVSMDQINFERNITEKLEKADINNDGRYTKEELKKALKDLGAYFPELRAIFCFMKADANKDGQISGEEIDTLIDYLLTRGFGKN 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00249 95 ProSitePatterns EF-hand calcium-binding domain. 68 80 IPR018247 -
Mepo4g00249 95 ProSiteProfiles EF-hand calcium-binding domain profile. 19 54 IPR002048 GO:0005509
Mepo4g00249 95 SUPERFAMILY EF-hand 24 80 IPR011992 -
Mepo4g00249 95 ProSiteProfiles EF-hand calcium-binding domain profile. 55 90 IPR002048 GO:0005509
Mepo4g00249 95 Pfam EF hand 63 83 IPR002048 GO:0005509
Mepo4g00249 95 Pfam EF hand 28 46 IPR002048 GO:0005509
Mepo4g00249 95 Gene3D - 27 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00249 Mepo-Chr4 4010855 4011440 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00249 32 83 EF-hand Containing Proteins AT3G59440 44.231 4.58e-07 43.9