Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00242 ATGTCTGTAAGGAGTGAACACCATCAAACGGTTCCTCTTTCGGTTCTATTGAAGAGGGAGTTGATGAGCGAGAAAATTGAGAAACCTGATATTGTTCATGGTCAAACTGGACAAAGTAAGAAAGGAGAGGATTTCGCGTTGTTAAAGTCTGATTGTCAGAGGATGGTTGGTGATGGGGTCTATACCTATTCCGTTTATGGGCTATTTGATGGACACAATGGATCTGCTGCTGCTATTTATTCCAAGGAGAATCTTCTAAATAATGTTGTTAGTGCAATTCCTCCGGATCTTAACAGAGACGAGTGGTTAGCAGCGTTGCCTAGAGCTTTGGTTGCTGGCTTTGTTAAAACTGATAAAGATTTTGCAGAGAAAGGACAAAAATCGGGAACAACTGTCACCTTTGTGATTATAGAAGGATGGGTTGTAACAGTTGCATCAGTTGGCGATTCCCGCTGCGTACTAGAATCTTCTGAAGGAGGGATTTATTACTTGTCAGCAGATCATAGGCTAGAAACAAATGAAGAAGAGAGGGTTCGTATCACTTCTAGCGGCGGTGAGGTTGGTCGTTTAAATACTGGGGGAGGTGCAGAGGTTGGTCCTTTGAGATGTTGGCCCGGTGGCTTGTGTCTTTCACGGTCTATTGGAGATATGGATATTGGTGAATTTGTTGTCCCTGTACCATATGTAAAACAAGTGAAGCTGTCCACCGCTGGAGGCCGGCTTGTTATCTGCAGTGATGGTGTTTGGGATGCCTTACCTGCGGAAGTGGCCCTTGACTGTTGTCGTGGCATGTCAGCAGAGTCTGCTGCACCACAGATTGTAAAAGAAGCTTTACAAGCAAAGGGACTTAGAGATGATACAACCTGTATTGTTGTCGATATATTACCTCAGGAGAAGCCACCTGCTCCTGTACCACATCAAAAGAAGCCAGTAAAAGGAATGCTCAAGGCCATGTTTCGTAAAAAGTCTTCGGAATCATCATCTACTGACAAAGAATACATGGAGCCAGATGTGGTAGTGGAGCTGTACGAGGAAGGCTCTGCTATGCTTTCAGAGAGGTTAGAAACAAAATATCCACTATGCAACATGTTCAAGTTGTTCATATGTGCAGTATGTCAAGTAGAAATAAAACCCGGAGAGGGTATTTCAGTACATGAGGGTGCAGAAAATCCTCAAAAAGTGCGCCCCTGGGACGGACCTTTCCTTTGCTTTAGTTGCCAGGAGAAGAAAGAAGCCATGGAAGGGAAAAGATCATCAGATAGACTTAGCAGTGGAAGTGACGAATGA 1287 0.4413 MSVRSEHHQTVPLSVLLKRELMSEKIEKPDIVHGQTGQSKKGEDFALLKSDCQRMVGDGVYTYSVYGLFDGHNGSAAAIYSKENLLNNVVSAIPPDLNRDEWLAALPRALVAGFVKTDKDFAEKGQKSGTTVTFVIIEGWVVTVASVGDSRCVLESSEGGIYYLSADHRLETNEEERVRITSSGGEVGRLNTGGGAEVGPLRCWPGGLCLSRSIGDMDIGEFVVPVPYVKQVKLSTAGGRLVICSDGVWDALPAEVALDCCRGMSAESAAPQIVKEALQAKGLRDDTTCIVVDILPQEKPPAPVPHQKKPVKGMLKAMFRKKSSESSSTDKEYMEPDVVVELYEEGSAMLSERLETKYPLCNMFKLFICAVCQVEIKPGEGISVHEGAENPQKVRPWDGPFLCFSCQEKKEAMEGKRSSDRLSSGSDE 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00242 428 SMART PP2C_4 22 292 IPR001932 -
Mepo4g00242 428 CDD PP2Cc 37 294 IPR001932 -
Mepo4g00242 428 Gene3D - 32 300 IPR036457 -
Mepo4g00242 428 SMART PP2C_SIG_2 40 294 IPR001932 -
Mepo4g00242 428 SUPERFAMILY PP2C-like 32 294 IPR036457 -
Mepo4g00242 428 PANTHER PROTEIN PHOSPHATASE 38 293 IPR015655 GO:0004722|GO:0006470
Mepo4g00242 428 MobiDBLite consensus disorder prediction 409 428 - -
Mepo4g00242 428 FunFam probable protein phosphatase 2C 12 33 300 - -
Mepo4g00242 428 Pfam Protein phosphatase 2C 55 282 IPR001932 -
Mepo4g00242 428 ProSiteProfiles PPM-type phosphatase domain profile. 28 294 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00242 Mepo-Chr4 3921340 3927147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00242 1 427 PP2C-type Phosphatase Gene Family AT1G47380 76.690 0.0 693
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g00242 4 3921340 3927147 Mepo4g00242 4 3921340 3927147 ECH
Mepo4g00242 4 3921340 3927147 Mepo3g07128 3 84944690 84948862 PCT