Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00208 ATGGGAAAGTTAAATGTGAGAAAACCTCACTTCTATCACCTGTTTAACCCTTCTTCAACCTCTCAATCTCTGAGAGTTCCAGATGGTTTTGTCCATCAAATGGAGGGCACGACATGCGGATTAGTTTCATTAACTGGTCCTAGTGGAAATACTTGGCAAGTTCGTTTAGTTGAGCAGGACAATCATTTGTTCTTTCATCATGGATGGTCAACATTTGTGGGAGATCATCATTTACAATACGGCGACCTTTTGGTTTTCAGATACGAGGGTCACTTGCATTTCACCGTGCAAGTATTTGGTGAGAATGCATGCGAAAAAGAAGCTGCATTTCATTCTGAGTGCAATCTAAATTCATTCAACTTCGATAATATTGAAGGACAGAAAAGTGATGCTGAGGTGATTTCTTCTTTGGATGTTGTTGAAGATGTTCAGAAGAAAATGAGGTGCGACGCCATTGAGAACCAGGAGCCTGAGTTTGCTATTGCTGGTAAAGATCTATCCAATTATGAGTTAGTTAGACCAATTAGTATGATCAGAGAAACAGAAGAAACCTGCAAAGAATGTTCAGCTAGTGCTGTCCATGTTCCTTTTCAAACAGGAAATAGTAATGAAGCTGAAGGGGCAGCAATCCTGTATAGAAGTGGGGAGGAAGATGACCACGATATTCTCAGCGGAGCTTCACTATCAAAGTTATCAGCACATGATGAGAAAAAGATAGCCCAATCATTTACGTCCTCTTTTCCATATTTTGTTAAAATAATTAAAACCTTCAATGTCAGTGGTTCATATACTCTGAATGTTCCATATCAATTTTCGATGTCACATTTTCCAAACTGCAAGACAAAGATTATTCTTCATAATTTGAAGGGAGAACACTGGACTGTTAATTCTGTTCCAACAACTAGAGTGCATACAAGTCACACTCTATGTGGAGGATGGATGGCTTTTGTTCGTGGCAATAGCATAAAAGTCGGAGATGTCTGCATTTTCGAACTTATACGTGAGTGTGAATTACGTGTTCGCATCGCTGAGGTTGGAAAAGATGGATTAGACTGCCAGGTTGGAAAACTAGCTTGTAGTATGCTTAGTGCAAGACATGATGTTGCTAGCCATAATACTTCCAGATTTATGCCGAAGAAACCTAAAGTTAGCTCAAAGTGCAGAACGAAGGTTGATCTATCAGATAAAAGGTTGTCAAAGATTGGTCAAGAAGCTGTTTTATCCATTGAATTCAAGAAATCTGGTAGAGCTGCAACTACTTCGAAGAAAATGGGGCTTTCCCCCAAGTCAAAAGCTGCCCATAAAAAGACGGCTGTACCGAGGAAACATCGTGTTGAAGATGAACTAAGTTCCCAGGCTAAAGCTGGTTTGAGAATGTTGTTTGCACTCGACGAACAAAGAGTAGCTGAAGCTTTTACTTCCCCATTTCCTAATTTTGTGAAAATCATGAAGAAGTTCAATGTCAGTGGATCATACACTTTGAAAATCCCATATCAGTTCTCTGCTGCACATCTCCCCGCCTACAAAACAGAAGTTACGCTTCGCAATTCAAGAGGCCAGTGTTGGATTGTAAACTCCGTTCCAGATGCCAAAGGCAGAACAATTCACACCTTTTGTGGGGGATGGATCGCCTTTGTTCGTGATAATGACATCAATTTTGGTGATACTTGCATTTTCGAGCTCGTTTCTCATTATGTGATGCAGGTTCATATATCCGGGGTTGGAAAGGAAGGTCTTGACCATCCAAATGAGCATGTGAAACTTAATAGCATCTAG 1776 0.4032 MGKLNVRKPHFYHLFNPSSTSQSLRVPDGFVHQMEGTTCGLVSLTGPSGNTWQVRLVEQDNHLFFHHGWSTFVGDHHLQYGDLLVFRYEGHLHFTVQVFGENACEKEAAFHSECNLNSFNFDNIEGQKSDAEVISSLDVVEDVQKKMRCDAIENQEPEFAIAGKDLSNYELVRPISMIRETEETCKECSASAVHVPFQTGNSNEAEGAAILYRSGEEDDHDILSGASLSKLSAHDEKKIAQSFTSSFPYFVKIIKTFNVSGSYTLNVPYQFSMSHFPNCKTKIILHNLKGEHWTVNSVPTTRVHTSHTLCGGWMAFVRGNSIKVGDVCIFELIRECELRVRIAEVGKDGLDCQVGKLACSMLSARHDVASHNTSRFMPKKPKVSSKCRTKVDLSDKRLSKIGQEAVLSIEFKKSGRAATTSKKMGLSPKSKAAHKKTAVPRKHRVEDELSSQAKAGLRMLFALDEQRVAEAFTSPFPNFVKIMKKFNVSGSYTLKIPYQFSAAHLPAYKTEVTLRNSRGQCWIVNSVPDAKGRTIHTFCGGWIAFVRDNDINFGDTCIFELVSHYVMQVHISGVGKEGLDHPNEHVKLNSI 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00208 591 Gene3D - 3 104 IPR015300 -
Mepo4g00208 591 SUPERFAMILY DNA-binding pseudobarrel domain 5 104 IPR015300 -
Mepo4g00208 591 SMART B3_2 479 577 IPR003340 GO:0003677
Mepo4g00208 591 SMART B3_2 11 102 IPR003340 GO:0003677
Mepo4g00208 591 SMART B3_2 250 346 IPR003340 GO:0003677
Mepo4g00208 591 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 19 348 IPR044837 -
Mepo4g00208 591 Gene3D - 231 346 IPR015300 -
Mepo4g00208 591 Gene3D - 464 574 IPR015300 -
Mepo4g00208 591 ProSiteProfiles B3 DNA-binding domain profile. 479 575 IPR003340 GO:0003677
Mepo4g00208 591 CDD B3_DNA 248 342 IPR003340 GO:0003677
Mepo4g00208 591 SUPERFAMILY DNA-binding pseudobarrel domain 243 343 IPR015300 -
Mepo4g00208 591 MobiDBLite consensus disorder prediction 419 447 - -
Mepo4g00208 591 ProSiteProfiles B3 DNA-binding domain profile. 9 102 IPR003340 GO:0003677
Mepo4g00208 591 Pfam B3 DNA binding domain 16 99 IPR003340 GO:0003677
Mepo4g00208 591 Pfam B3 DNA binding domain 479 564 IPR003340 GO:0003677
Mepo4g00208 591 Pfam B3 DNA binding domain 250 342 IPR003340 GO:0003677
Mepo4g00208 591 ProSiteProfiles B3 DNA-binding domain profile. 250 346 IPR003340 GO:0003677
Mepo4g00208 591 SUPERFAMILY DNA-binding pseudobarrel domain 472 573 IPR015300 -
Mepo4g00208 591 CDD B3_DNA 9 99 IPR003340 GO:0003677
Mepo4g00208 591 CDD B3_DNA 477 571 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00208 Mepo-Chr4 3476737 3509414 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mepo4g00208 B3 4.1e-12 CL0405