Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07937 ATGGCTTCGAGTTCGAATTGGACAACAAAGCAGAACAAAAGATTTGAGAATGCGTTGGCAATGTTGGACAAGGACACTCCGGATCGTTGGCAGAAGCTGGCTAGAGCTGTGGGAGGGAAGACTGTTGAAGAAGTGAAAAAACATTATGAGAACCTTGTTGAAGATGTTAGGCAGATCGAGGAAGGCCATGTTCCCCTGCCTAATTATACAAATATTGTTGGTTACAGTTACATAATGGATCAAGATAAAAGGATGAAGGCTCCAAGTCTCCACTAA 276 0.4275 MASSSNWTTKQNKRFENALAMLDKDTPDRWQKLARAVGGKTVEEVKKHYENLVEDVRQIEEGHVPLPNYTNIVGYSYIMDQDKRMKAPSLH 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07937 91 ProSiteProfiles SANT domain profile. 2 57 IPR017884 -
Mepo3g07937 91 ProSiteProfiles Myb-like domain profile. 1 53 IPR001005 -
Mepo3g07937 91 Gene3D - 1 66 - -
Mepo3g07937 91 FunFam Transcription factor SRM1 1 66 - -
Mepo3g07937 91 SMART sant 3 55 IPR001005 -
Mepo3g07937 91 SUPERFAMILY Homeodomain-like 5 61 IPR009057 -
Mepo3g07937 91 CDD SANT 6 53 IPR001005 -
Mepo3g07937 91 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 3 76 IPR044636 GO:0003700
Mepo3g07937 91 Pfam Myb-like DNA-binding domain 5 52 IPR001005 -
Mepo3g07937 91 Coils Coil 42 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07937 Mepo-Chr3 92292108 92293094 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo3g07937 Myb_DNA-binding 2e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07937 3 92292108 92293094 Mepo3g07937 3 92292108 92293094 ECH
Mepo4g01778 4 23080852 23081982 Mepo3g07937 3 92292108 92293094 PCT