Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07905 ATGTCAAACTCCATGACCCATCAAAATCAATTTGAGAACCAAGAACTACTAGGTGGTGGTTATGTTTCATCCTCTTTGAGGAGCAACAATGCATATCATGAATCACTTGGAACATTTTCTAACAATATTGGAATAGCACAAGGTTCTGAGATGAGTCACACAAGACATTTGATGGATCTACTTGGTGCAGCAAACGAGAATAATCACCAGACACAACAAGGCCTATCACTTTCTTTAGGCTCTCACATGCTTGTTGATGAATACAGAAACCGTTCCTTAAATCAAGGTCTTATGATCAACCCAAGTTACTTCATGCCTGGTCAAGATCAGACACGTGAGCCTTGTAATCAACCTGTGGTGGAGAATCTAACAAGTGATTATTTTTTCAGTGGAGGTGGAACTTTTGCTTCAGGTTCTAATAATAATAACTCATTATTGAACCGTTCTACTTCTACTTCTTATGGAAGTGAGAGTTTTGGTTCTGTTATTGGGAACTCAAGATACCTTAAACCAGTACAGTCACTTCTTGAAGATGTTGTTGATGTTGGTGGAAATGTGATTGATAGAATGAATGAAAAGTATGCTGAAAAGTTGTTTCATGGGAGTAGAACAGGTGCTAGAACACTCTCCTCTGACCTCAAAGCAGAGTTGAGGATTCATGGACATTTATTGGCTGACAAACATGAACATCAAGTCAAAATTGCAAAGCTCATTGCATTGTTGGATGAGGTTGAGGGTAGATATGAGAAGTACTACCATCAAATGGAAGAAGTGGTATCATCTTTTGAAATGATAGCAGGTTTGGGAGCTGCAAAGTGTTACACTGCTTTGGCACTTCAGGCAATGTCTAGGCATTTTTGTAGCTTAAGAGATGCCATAATGTCCCAAATAAATGCTGAGAAGAGAAAACTGTTTCAGGATGTACCTAAAATTAATAGTGGATTGTCTCAACTGAGCTTATTTGAGAGAGATAATAATAATAGACAGAATAGAATGTCTCTCCAACAACTTGGAGTCATTCAAAACCAACGACAAGTTTGGAGACCTATTAGAGGGTTACCTGAAACATCTGTAGCAATTCTTCGTGCTTGGCTCTTTGAGCACTTTCTTCATCCCTATCCTAATGATTCTGAGAAGTTAATCCTGGCTTCCCAAACAGGTTTAACCAAAAACCAAGTGTCAAATTGGTTCATTAATGCAAGGGTACGGCTATGGAAACCAATGATAGAAGAAATGTACAAAGAAGAGTTTGGAGACTCTTCTGAAGACTCCAACCCGCCAGCTAACAATTTTATGTCAAGGGAAGATGTCACTGTGGAGGATTAG 1326 0.3884 MSNSMTHQNQFENQELLGGGYVSSSLRSNNAYHESLGTFSNNIGIAQGSEMSHTRHLMDLLGAANENNHQTQQGLSLSLGSHMLVDEYRNRSLNQGLMINPSYFMPGQDQTREPCNQPVVENLTSDYFFSGGGTFASGSNNNNSLLNRSTSTSYGSESFGSVIGNSRYLKPVQSLLEDVVDVGGNVIDRMNEKYAEKLFHGSRTGARTLSSDLKAELRIHGHLLADKHEHQVKIAKLIALLDEVEGRYEKYYHQMEEVVSSFEMIAGLGAAKCYTALALQAMSRHFCSLRDAIMSQINAEKRKLFQDVPKINSGLSQLSLFERDNNNRQNRMSLQQLGVIQNQRQVWRPIRGLPETSVAILRAWLFEHFLHPYPNDSEKLILASQTGLTKNQVSNWFINARVRLWKPMIEEMYKEEFGDSSEDSNPPANNFMSREDVTVED 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07905 441 SMART HOX_1 347 411 IPR001356 GO:0003677
Mepo3g07905 441 Pfam Associated with HOX 162 294 IPR006563 -
Mepo3g07905 441 SMART prehox3 157 295 IPR006563 -
Mepo3g07905 441 Gene3D - 341 422 - -
Mepo3g07905 441 Pfam Homeobox KN domain 364 403 IPR008422 GO:0003677|GO:0006355
Mepo3g07905 441 ProSiteProfiles 'Homeobox' domain profile. 366 407 IPR001356 GO:0003677
Mepo3g07905 441 CDD homeodomain 347 408 IPR001356 GO:0003677
Mepo3g07905 441 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 78 424 - -
Mepo3g07905 441 SUPERFAMILY Homeodomain-like 353 415 IPR009057 -
Mepo3g07905 441 MobiDBLite consensus disorder prediction 416 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07905 Mepo-Chr3 92070435 92072893 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Mepo3g07905 POX 1.4e-40 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07905 3 92070435 92072893 Mepo3g07905 3 92070435 92072893 ECH
Mepo4g01821 4 23403592 23408024 Mepo3g07905 3 92070435 92072893 PCT