Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07904 ATGTATCCCAACCAAGCATTCTCTTCAGGGTCCTATATGGATATGTTCACCTCGAGTCCTTTGTTACCTCACAATTACTACAATGAATCTGTAGCAGAACAAAATGAAGCCAAGTTTAACACGCCTATAGGCGACACAGTGACTATGCAGTCCATTGATGCACATTCCAATGCTTACAACTCTCATGTAGATGAGCAAAATATACAATGCCAAGAGTTATCTCTTAGTCTTGGGACACTACTGCCTTCTAATGCATCTGTCCCTCCATTTCAATACCAGTATAATGACACTGGTTTCGTATCGCTGATGAATGCTTGTCGTCTTCCAAACGGAACTACTATATCTAAAGAAGATGAATTGACAAGTGTCGAATGCATGGAAAGCATTTCTTCTGGAGGATTTCACGACATTACCAAAAGGGAGTGTTTTCGCAACCCTCACTCATCAGATCAATGCCTGCAGGATTCCCAAGGTTTTTCTAACATTTACCTAAACTCTCAATATCTTAAGGCTACACAGGAGTTACTTGATGAGATAGTTAATGTCCGAAAGCAACGTGGAATGGAAAAGCAAGAAAAAATCCGCAACATTGGATTGGATAATCCCAAAGATAGTGATGGAAAATCAACTAGTCAGTCTATGCAAATAACTTCAGGGGGACCTAATGATCCTAATTCCAATCCTTCTCGTGAGATATCCTCAACCGAAAGACAGAATTTGTTGGATAAGAAGACAAAGCTTTTGTCCATGTTGGATGAGGTAGACAAAAGATACAGACAGTACTGCCATCGGATGCAAATTGTGGTGTCATCTTTGGACATGGTTGCTGGGGGTGGAGCAGCAGAGCCATATACTACACTTGCATTGCGAACAATTTCACGTCAGTTTCGCTGCTTGCGCGATGCTATCAGCAACCAAGTTCAAGTGATTCAAAGGAGCCTTGGGGAACAAGAAGGAATACCTCGTCTCCGATATGTTGATCAACAGCTTAGACAACAAAAGGCCCTTCAGCATCTTGGTGTTATGCGACAAGCTTGGAGACCTCAGAGAGGACTTCCCGAAAACTCTGTTTCAATACTTCGTGCTTGGCTCTTTGAACATTTTCTTAATCCTTACCCCAAGGATTCAGAGAAAATAATGCTAGCTAGGCAAACTGGTTTGACAAGGAATCAGGTGGCAAATTGGTTCATTAATGCACGTGTGCGTCTTTGGAAACCAATGGTTGAGGAAATATACAAAGAAGAGTTTGGTGATTCTGAAATGAACTGCAATTTTTCATCTGAAAATACACTCCAAGGTAAAAGAGATTATGGTCAAGAGATTAATAATAAATTGGAAGAAGAGTCACAAGACAATGTACAAATTATTACTAGTGATCATAGTGTACAAGCCTCTTCCACTAGAGAACATGTAGAAAAAAATGTGATAGATTGTGGAAATGGAAAATTGCATGGTAACCAAAGGCTCAGCATAAAAAATGGCTTTTATTCACAAATAGATTCTGATTCTGCCACATATGATTTAACAGAGTTGGGTAACTTTACAACTGTGGATGGTGGTGGTGGCCACAACAATGTCTCTCTTGCATTGGAGTTGAGAAACTGTGAAAGCGATGGATTAGCCACATCTGATGATGCCATTCATAAAAGACATAATAATAATAATAATCAGACATTGGTTTCTTCTTCACAGAGTACTGATTTACTAGACTATCATTTCACAGATTCAGGAAAGCAACAACACATGTTTGGCAATACTCATCTGTTGCATGAATTTGTCGTATGA 1785 0.3966 MYPNQAFSSGSYMDMFTSSPLLPHNYYNESVAEQNEAKFNTPIGDTVTMQSIDAHSNAYNSHVDEQNIQCQELSLSLGTLLPSNASVPPFQYQYNDTGFVSLMNACRLPNGTTISKEDELTSVECMESISSGGFHDITKRECFRNPHSSDQCLQDSQGFSNIYLNSQYLKATQELLDEIVNVRKQRGMEKQEKIRNIGLDNPKDSDGKSTSQSMQITSGGPNDPNSNPSREISSTERQNLLDKKTKLLSMLDEVDKRYRQYCHRMQIVVSSLDMVAGGGAAEPYTTLALRTISRQFRCLRDAISNQVQVIQRSLGEQEGIPRLRYVDQQLRQQKALQHLGVMRQAWRPQRGLPENSVSILRAWLFEHFLNPYPKDSEKIMLARQTGLTRNQVANWFINARVRLWKPMVEEIYKEEFGDSEMNCNFSSENTLQGKRDYGQEINNKLEEESQDNVQIITSDHSVQASSTREHVEKNVIDCGNGKLHGNQRLSIKNGFYSQIDSDSATYDLTELGNFTTVDGGGGHNNVSLALELRNCESDGLATSDDAIHKRHNNNNNQTLVSSSQSTDLLDYHFTDSGKQQHMFGNTHLLHEFVV 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07904 594 SMART HOX_1 346 410 IPR001356 GO:0003677
Mepo3g07904 594 CDD homeodomain 346 407 IPR001356 GO:0003677
Mepo3g07904 594 SMART prehox3 157 305 IPR006563 -
Mepo3g07904 594 Pfam Associated with HOX 164 304 IPR006563 -
Mepo3g07904 594 Gene3D - 343 420 - -
Mepo3g07904 594 Pfam Homeobox KN domain 363 402 IPR008422 GO:0003677|GO:0006355
Mepo3g07904 594 MobiDBLite consensus disorder prediction 203 235 - -
Mepo3g07904 594 MobiDBLite consensus disorder prediction 191 239 - -
Mepo3g07904 594 ProSiteProfiles 'Homeobox' domain profile. 343 406 IPR001356 GO:0003677
Mepo3g07904 594 SUPERFAMILY Homeodomain-like 347 412 IPR009057 -
Mepo3g07904 594 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 107 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07904 Mepo-Chr3 92062241 92066086 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Mepo3g07904 POX 6.2e-46 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07904 3 92062241 92066086 Mepo3g07904 3 92062241 92066086 ECH
Mepo3g07904 3 92062241 92066086 Mepo4g01821 4 23403592 23408024 PCT