Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07898 ATGGCAGCAGAAGAGGGACAAGTGATCGGAGTTCACACTGTTGATGCTTGGAAGGAACATCTCGAGAAGGGAAATGGATCCAAGAAACTGATTGTAGTTGATTTCACTGCTTCTTGGTGTGGACCATGCCGTTTCATTGCCCCAATTTTGGCAGAGATTGCTAAAAAGCTGCCAAATGTCACCTTCCTCAAGGTTGATGTTGATGAATTGAAGACTGTTGCTGAGGAGTGGGCAATTGATGCTATGCCAACATTCCTGTTCTTGAAAGAAGGAAAACTTGTGGACAAGGTTGTTGGTGCTCAGAAGGAGCAGCTGCAAGCAGCAATAACCAAGCATGCAACCACTGATGCTTGA 354 0.4548 MAAEEGQVIGVHTVDAWKEHLEKGNGSKKLIVVDFTASWCGPCRFIAPILAEIAKKLPNVTFLKVDVDELKTVAEEWAIDAMPTFLFLKEGKLVDKVVGAQKEQLQAAITKHATTDA 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07898 117 Pfam Thioredoxin 11 110 IPR013766 -
Mepo3g07898 117 CDD TRX_family 19 109 - -
Mepo3g07898 117 PANTHER THIOREDOXIN 8 111 - -
Mepo3g07898 117 ProSitePatterns Thioredoxin family active site. 32 50 IPR017937 -
Mepo3g07898 117 Gene3D Glutaredoxin 1 116 - -
Mepo3g07898 117 FunFam Thioredoxin 7 114 - -
Mepo3g07898 117 ProSiteProfiles Thioredoxin domain profile. 1 114 IPR013766 -
Mepo3g07898 117 PRINTS Thioredoxin family signature 39 48 - -
Mepo3g07898 117 PRINTS Thioredoxin family signature 31 39 - -
Mepo3g07898 117 PRINTS Thioredoxin family signature 78 89 - -
Mepo3g07898 117 NCBIfam thioredoxin 25 112 IPR005746 GO:0015035
Mepo3g07898 117 SUPERFAMILY Thioredoxin-like 5 113 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07898 Mepo-Chr3 92011829 92013942 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07898 3 92011829 92013942 Mepo3g07898 3 92011829 92013942 ECH
Mepo4g01823 4 23436091 23438250 Mepo3g07898 3 92011829 92013942 PCT