Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07829 ATGACTCAAGATCTTGAGATGAAAGATCGTTCTACTCCTTCCAATTCTGTTTCTCCACCAGTTCCATCTACTTTGCAGCATTTGAAGGAGATAGCGTCCGTTATTGAGACCGGTTCGTACTCGAAGGAAGTTCGTCGAATTGCTCGTGCTGTTCGTCTTACAATTGCATTGAGGAAGAAATTAACAGCTCCTGTCATATCTTCTTTTCTCGATCATGTTCTCACTCCTGGTTCTGAACCTCATGCTAAATTGTCTGCTTATCTTCCCAAGGAGGATGATCATGAGATGGAGGTGGACGCCACAACATCTGCCATTCAAACCCCTACCCCTACAGCTAAACACTTGTTGCCTGAGCTAGAAATTTACTGTTGCCTGCTTGTACTACTTTTTCTGATTGATCAGAAAAAATACAACGAGGCCAAAGCTTGTTCTTCAGCTAGTGTTGCTTGGCTGAAGAACGTGAACAGAAGAACTGTCGATGTTATTGCATCTAGGCTATTTTTTTACTATTCATACAGCCATGAACTTACTGGAGATTTGGCTGAAATTCGGGGAAACCTACTTGCATTGCATCGGATTGCCACCCTTCGCCATGATGAGTTGGGTCAGGAAACCCTTCTTAATTTGCTGCTTCGCAACTATCTTCACTACAACCTATATGACCAGGCAGAGAAGTTGAGGTCAAAGGCTCCACGATTTGAAGCACATTCAAACCAGCAGTTCTGTCGTTATCTCTTCTACCTCGGGAAAATCCGGACTATTCAATTGGAGTATACAGATGCAAAAGAGTCTCTCCTGCAAGCTGCTCGTAAAGCTCCAGTTGCAGCTCGGGGTTTTCGAATTCAATGTAACAAGTGGGCTATCATAGTGCGTTTACTGTTAGGAGAAATACCTGAGCGAACTGTCTTTATGCAGAAAGGAATGGAGAAAGCGCTAAGACCTTACTTTGAGCTTACAAATGCTGTCCGTATTGGAGATTTGGAGCTGTTTAGGAACATTGCAGATAAGTTTGCAACCACCTTCGGTGCAGACGGAACTCATAATTTGATTGTTCGTCTCCGACATAATGTCATCAGGACTGGTTTACGTAACATCAGCATCTCCTATTCTCGCATCTCACTAGCTGATGTTGCTAAAAAGTTGAGGTTGGACTCGCCAAATCCTGTTGCTGATGCTGAGAGCATTGTGTCGAAGGCTATTCGTGATGGGGCAATTGATGCTACATTGGATCATGCAAATGGGTGGATGGTGTCTAAGGAAACAGGAGATATTTACTCCACAAATGAGCCTCAGCTGGCTTTCAATTCTCGAATTGCCTTCTGTCTTAACATGCACAATGAAGCTGTTAGAGCACTTCGTTTTCCACCAGACACACACAAAGAAAAAGAAAGTGCTGAAAAGAGAAGAGAGAGACAACAGCAAGAGCAGGAACTGGCCAAACATATTGCAGAGGAGGATGATGATGATTTCTGA 1473 0.4352 MTQDLEMKDRSTPSNSVSPPVPSTLQHLKEIASVIETGSYSKEVRRIARAVRLTIALRKKLTAPVISSFLDHVLTPGSEPHAKLSAYLPKEDDHEMEVDATTSAIQTPTPTAKHLLPELEIYCCLLVLLFLIDQKKYNEAKACSSASVAWLKNVNRRTVDVIASRLFFYYSYSHELTGDLAEIRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVAARGFRIQCNKWAIIVRLLLGEIPERTVFMQKGMEKALRPYFELTNAVRIGDLELFRNIADKFATTFGADGTHNLIVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDSPNPVADAESIVSKAIRDGAIDATLDHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRALRFPPDTHKEKESAEKRRERQQQEQELAKHIAEEDDDDF 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07829 490 Pfam PCI domain 314 419 IPR000717 -
Mepo3g07829 490 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 348 441 IPR000717 -
Mepo3g07829 490 Pfam Proteasome regulatory subunit C-terminal 423 489 IPR013586 GO:0000502|GO:0030234|GO:0042176
Mepo3g07829 490 SMART PCI/PINT associated module 177 348 - -
Mepo3g07829 490 ProSiteProfiles PCI domain profile. 242 423 IPR000717 -
Mepo3g07829 490 MobiDBLite consensus disorder prediction 1 22 - -
Mepo3g07829 490 Gene3D - 237 444 - -
Mepo3g07829 490 SUPERFAMILY "Winged helix" DNA-binding domain 349 424 IPR036390 -
Mepo3g07829 490 Coils Coil 462 484 - -
Mepo3g07829 490 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3 12 481 - -
Mepo3g07829 490 MobiDBLite consensus disorder prediction 454 483 - -
Mepo3g07829 490 FunFam 26S proteasome non-ATPase regulatory subunit 3 123 446 - -
Mepo3g07829 490 MobiDBLite consensus disorder prediction 454 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07829 Mepo-Chr3 91391536 91396621 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07829 3 91391536 91396621 Mepo3g07829 3 91391536 91396621 ECH
Mepo4g01927 4 24536949 24542837 Mepo3g07829 3 91391536 91396621 PCT