Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07828 ATGCTTGATACAGTTCTTTTGGCGCTTTTTCTTCCTTGTTTAGGAATGAGTGCCATCTTCGTCGTCTACATGTGCCTTCTCTACGCCACCACTCGTCACCGTTCAGATTCAAATCCACCGTTGAAGCCGGTCACTGATAAGGGTCTCTCCCCTTTAGATCTTGAAAATCTTCCCAAAATCACCGGTAAGGAATTGCTCGCGCCAATCGAATGCGCCGTTTGCCTTGACGATATTGTTGATGAACAACCGGCTCGTCTGCTTCCCGGTTGTAACCACGCTTTTCATCTTCAATGTGCTGACACGTGGCTCTCCAAACACCCTATGTGTCCTCTATGTAGAGCAAAACTTGACCCTCAGAATCTCAAGTCTGAGAGTCCCTGCTGA 384 0.4792 MLDTVLLALFLPCLGMSAIFVVYMCLLYATTRHRSDSNPPLKPVTDKGLSPLDLENLPKITGKELLAPIECAVCLDDIVDEQPARLLPGCNHAFHLQCADTWLSKHPMCPLCRAKLDPQNLKSESPC 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07828 127 ProSiteProfiles Zinc finger RING-type profile. 71 113 IPR001841 -
Mepo3g07828 127 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 16 123 - -
Mepo3g07828 127 Pfam Ring finger domain 70 113 IPR001841 -
Mepo3g07828 127 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 34 119 IPR013083 -
Mepo3g07828 127 SUPERFAMILY RING/U-box 70 119 - -
Mepo3g07828 127 SMART ring_2 71 112 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07828 Mepo-Chr3 91387584 91388709 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07828 3 91387584 91388709 Mepo3g07828 3 91387584 91388709 ECH
Mepo4g01930 4 24555712 24556638 Mepo3g07828 3 91387584 91388709 PCT